FFCP PHASE1:Hg19::chr7:7679633..7679653,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:7679633..7679653,- to FFCP PHASE1:Hg19::chr7:7679633..7679653,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6119 | |EntrezGene=6119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10291 | |HGNC=10291 | ||
|TSSclassifier=strong | |||
|UniProt=B5MC59 | |UniProt=B5MC59 | ||
|association_with_transcript=3bp_to_ENST00000401447_5end | |||
|cluster_id=chr7:7679633..7679653,- | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_7_at_RPA3_5end | |||
|id=chr7:7679633..7679653,- | |||
|ontology_enrichment_celltype=CL:0000791!1.07e-25!18;CL:0000789!1.07e-25!18;CL:0002420!1.07e-25!18;CL:0002419!1.07e-25!18;CL:0000790!1.07e-25!18;CL:0000838!2.57e-18!52;CL:0000542!8.12e-18!53;CL:0000051!8.12e-18!53;CL:0000084!4.55e-17!25;CL:0000827!4.55e-17!25;CL:0000625!1.31e-16!11;CL:0000738!2.52e-14!140;CL:0000624!1.15e-12!6;CL:0000988!2.90e-12!182;CL:0000037!3.10e-12!172;CL:0000566!3.10e-12!172;CL:0002087!2.66e-10!119;CL:0002031!3.28e-10!124;CL:0002032!1.59e-09!165;CL:0000837!1.59e-09!165;CL:0000080!1.41e-07!6;CL:0000898!4.43e-07!3;CL:0000623!4.43e-07!3;CL:0000825!4.43e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.33e-43;6!CL:0000791;8.89e-39;18!CL:0000789;8.89e-39;18!CL:0002419;8.89e-39;18!CL:0000084;1.81e-27;25!CL:0000898;3.37e-22;3!CL:0000623;4.66e-22;3!CL:0000815;5.13e-15;2!CL:0000792;5.13e-15;2!CL:0002677;5.13e-15;2!CL:0000542;1.10e-11;53!CL:0000625;6.64e-11;11!CL:0000767;3.64e-10;3!CL:0000895;6.03e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.75e-43,6;CL:0000791,8.73e-39,18;CL:0000789,8.73e-39,18;CL:0002420,8.73e-39,18;CL:0002419,8.73e-39,18;CL:0000790,8.73e-39,18;CL:0000084,1.79e-27,25;CL:0000827,1.79e-27,25;CL:0000898,3.49e-22,3;CL:0000623,3.49e-22,3;CL:0000825,3.49e-22,3;CL:0000838,3.83e-21,52;CL:0000542,1.07e-20,53;CL:0000051,1.07e-20,53;CL:0000815,5.32e-15,2;CL:0000792,5.32e-15,2;CL:0002677,5.32e-15,2;CL:0000738,7.44e-12,136;CL:0002087,4.23e-11,115;CL:0000625,6.90e-11,11;CL:0000037,2.92e-10,168;CL:0000767,3.16e-10,3;CL:0000988,1.44e-09,177;CL:0002032,1.67e-09,161;CL:0000837,1.67e-09,161;CL:0002031,4.87e-09,120;CL:0000810,6.03e-09,1;CL:0000895,6.03e-09,1;CL:0002436,6.03e-09,1;CL:0002427,6.03e-09,1;CL:0002428,6.03e-09,1;CL:0002429,6.03e-09,1;CL:0002433,6.03e-09,1;CL:0002431,6.03e-09,1;CL:0002432,6.03e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;8.89e-39;18!CL:0000051;1.10e-11;53!CL:0002427;6.03e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.91914699048606,1.23852898652861,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,4.32761494250433,4.71612915298998,5.96244347098577,0.334372990781356,2.93330039970231,1.89379122293893,0,1.22551502573691,1.17842362989935,2.21533894583621,2.70803863765016,0.25618263945135,0.520237390239513,0,0.276350017785848,0,6.96946846861684,3.21048993707656,4.18142095219907,0.226618685395132,7.2811893784365,6.18529401868734,5.56643322442906,0.637130828648193,0,0.950452044448374,0.752875595388864,0.383959833463255,2.49861453104692,0.236777252044017,0.821127996921047,8.87069670188823,5.34880391567015,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.621984346622316,0.144119953416961,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,5.51686128565396,1.94064817373566,2.69520376187472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.862856803274467,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.889563386041866,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.91914699048606,1.23852898652861,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,4.32761494250433,4.71612915298998,5.96244347098577,0.334372990781356,2.93330039970231,1.89379122293893,0,1.22551502573691,1.17842362989935,2.21533894583621,2.70803863765016,0.25618263945135,0.520237390239513,0,0.276350017785848,0,6.96946846861684,3.21048993707656,4.18142095219907,0.226618685395132,7.2811893784365,6.18529401868734,5.56643322442906,0.637130828648193,0,0.950452044448374,0.752875595388864,0.383959833463255,2.49861453104692,0.236777252044017,0.821127996921047,8.87069670188823,5.34880391567015,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.621984346622316,0.144119953416961,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,5.51686128565396,1.94064817373566,2.69520376187472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.862856803274467,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.889563386041866,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@RPA3 | |||
}} | }} |
Latest revision as of 14:16, 19 September 2015
Short description: | p7@RPA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RPA3_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 3bp_to_ENST00000401447_5end |
EntrezGene: | RPA3 |
HGNC: | 10291 |
UniProt: | B5MC59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data