FFCP PHASE1:Hg19::chr7:44530483..44530518,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:44530483..44530518,- to FFCP PHASE1:Hg19::chr7:44530483..44530518,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23386 | |EntrezGene=23386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22208 | |HGNC=22208 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVD9 | |UniProt=Q8IVD9 | ||
|association_with_transcript=-4bp_to_ENST00000355451_5end | |||
|cluster_id=chr7:44530483..44530518,- | |||
|description=CAGE_peak_3_at_NUDCD3_5end | |||
|id=chr7:44530483..44530518,- | |||
|ontology_enrichment_celltype=CL:0000791!1.77e-09!18;CL:0000789!1.77e-09!18;CL:0002420!1.77e-09!18;CL:0002419!1.77e-09!18;CL:0000790!1.77e-09!18;CL:0000084!2.68e-07!25;CL:0000827!2.68e-07!25;CL:0000625!9.26e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.40e-15;18!CL:0000789;4.40e-15;18!CL:0002419;4.40e-15;18!CL:0000084;6.12e-13;25!CL:0000625;1.30e-09;11!CL:0000624;1.63e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.92e-15,18;CL:0000789,9.92e-15,18;CL:0002420,9.92e-15,18;CL:0002419,9.92e-15,18;CL:0000790,9.92e-15,18;CL:0000084,9.10e-13,25;CL:0000827,9.10e-13,25;CL:0000542,3.29e-11,53;CL:0000051,3.29e-11,53;CL:0000838,7.95e-11,52;CL:0000625,2.68e-09,11;CL:0000624,1.80e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.40e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-16!115;UBERON:0001049!2.83e-13!57;UBERON:0005068!2.83e-13!57;UBERON:0006241!2.83e-13!57;UBERON:0007135!2.83e-13!57;UBERON:0003080!5.39e-13!42;UBERON:0002020!6.26e-13!34;UBERON:0003528!6.26e-13!34;UBERON:0002780!1.57e-12!41;UBERON:0001890!1.57e-12!41;UBERON:0006240!1.57e-12!41;UBERON:0001893!3.05e-12!34;UBERON:0001869!4.93e-12!32;UBERON:0002791!6.46e-12!33;UBERON:0002346!3.06e-11!90;UBERON:0002616!2.05e-10!59;UBERON:0002619!3.09e-10!22;UBERON:0003075!6.53e-10!86;UBERON:0007284!6.53e-10!86;UBERON:0005743!9.63e-10!86;UBERON:0000073!1.37e-09!94;UBERON:0001016!1.37e-09!94;UBERON:0001017!1.68e-09!82;UBERON:0001950!2.53e-09!20;UBERON:0003056!6.02e-09!61;UBERON:0000955!1.24e-08!69;UBERON:0006238!1.24e-08!69;UBERON:0000956!3.37e-08!25;UBERON:0000203!3.37e-08!25;UBERON:0002420!5.60e-07!9;UBERON:0007245!5.60e-07!9;UBERON:0010009!5.60e-07!9;UBERON:0010011!5.60e-07!9;UBERON:0000454!5.60e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.99e-19;32!UBERON:0003528;2.37e-19;34!UBERON:0002020;2.37e-19;34!UBERON:0001869;2.57e-19;32!UBERON:0001893;5.78e-18;34!UBERON:0002619;1.66e-17;22!UBERON:0001950;4.74e-16;20!UBERON:0002780;5.50e-15;41!UBERON:0001890;5.50e-15;41!UBERON:0000956;1.31e-14;25!UBERON:0000203;1.31e-14;25!UBERON:0002420;7.67e-11;9!UBERON:0007245;7.67e-11;9!UBERON:0010009;7.67e-11;9!UBERON:0010011;7.67e-11;9!UBERON:0000454;7.67e-11;9!UBERON:0000073;1.03e-10;53!UBERON:0002616;1.03e-10;53!UBERON:0000125;2.74e-10;9!UBERON:0002308;2.74e-10;9!UBERON:0009663;6.69e-09;7!UBERON:0001017;5.92e-08;75!UBERON:0000955;6.33e-08;68!UBERON:0001016;1.26e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.08e-23,34;UBERON:0002020,2.08e-23,34;UBERON:0002791,6.40e-22,32;UBERON:0001869,8.29e-22,32;UBERON:0001893,1.57e-21,34;UBERON:0001049,2.86e-21,56;UBERON:0005068,2.86e-21,56;UBERON:0006241,2.86e-21,56;UBERON:0007135,2.86e-21,56;UBERON:0002780,5.63e-21,41;UBERON:0001890,5.63e-21,41;UBERON:0003080,5.63e-21,41;UBERON:0006240,5.63e-21,41;UBERON:0000073,5.32e-19,53;UBERON:0002616,5.32e-19,53;UBERON:0002346,7.75e-18,86;UBERON:0002619,7.86e-18,22;UBERON:0001016,2.70e-16,89;UBERON:0001950,3.23e-16,20;UBERON:0001017,1.63e-15,81;UBERON:0003075,1.65e-15,82;UBERON:0007284,1.65e-15,82;UBERON:0000956,6.86e-15,25;UBERON:0000203,6.86e-15,25;UBERON:0000955,9.69e-15,68;UBERON:0006238,9.69e-15,68;UBERON:0003056,1.07e-13,61;UBERON:0007023,2.60e-13,114;UBERON:0002420,4.26e-11,9;UBERON:0007245,4.26e-11,9;UBERON:0010009,4.26e-11,9;UBERON:0010011,4.26e-11,9;UBERON:0000454,4.26e-11,9;UBERON:0010371,1.46e-10,104;UBERON:0000125,1.77e-10,9;UBERON:0002308,1.77e-10,9;UBERON:0009663,4.41e-09,7;UBERON:0004121,1.01e-08,171;UBERON:0000924,1.01e-08,171;UBERON:0006601,1.01e-08,171 | |||
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| ||
|short_description=p3@NUDCD3 | |||
}} | }} |
Latest revision as of 17:18, 18 September 2015
Short description: | p3@NUDCD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NUDCD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000355451_5end |
EntrezGene: | NUDCD3 |
HGNC: | 22208 |
UniProt: | Q8IVD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.92e-15 | 18 |
alpha-beta T cell | 9.92e-15 | 18 |
immature T cell | 9.92e-15 | 18 |
mature T cell | 9.92e-15 | 18 |
immature alpha-beta T cell | 9.92e-15 | 18 |
T cell | 9.10e-13 | 25 |
pro-T cell | 9.10e-13 | 25 |
lymphocyte | 3.29e-11 | 53 |
common lymphoid progenitor | 3.29e-11 | 53 |
lymphoid lineage restricted progenitor cell | 7.95e-11 | 52 |
CD8-positive, alpha-beta T cell | 2.68e-09 | 11 |
CD4-positive, alpha-beta T cell | 1.80e-08 | 6 |