FFCP PHASE1:Hg19::chr7:41728212..41728233,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:41728212..41728233,- to FFCP PHASE1:Hg19::chr7:41728212..41728233,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:41728212..41728233,- | |||
|coexpression_cluster_id=C775 | |||
|description=CAGE_peak_at_chr7:41728212..41728233,- | |||
|id=chr7:41728212..41728233,- | |||
|ontology_enrichment_celltype=CL:0000055!3.66e-11!180;CL:0000144!1.61e-10!625;CL:0002334!5.98e-10!12;CL:0002371!1.20e-09!591;CL:0000548!5.34e-08!679;CL:0000004!5.34e-08!679;CL:0000255!5.34e-08!679;CL:0000359!6.51e-08!32;CL:0000012!1.01e-07!682;CL:0000723!1.56e-07!436;CL:0000034!4.74e-07!444;CL:0000048!5.34e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.20e-13;12!CL:0002615;2.14e-10;3!CL:0000138;6.93e-09;6!CL:0000153;7.30e-09;9!CL:0000447;7.30e-09;9!CL:0002593;6.93e-08;2!CL:0002583;1.75e-07;2!CL:0000327;3.04e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.61e-13,12;CL:0002615,4.43e-10,3;CL:0000058,4.19e-09,6;CL:0000138,4.19e-09,6;CL:0000153,6.65e-09,9;CL:0000447,6.65e-09,9;CL:0002583,8.73e-08,2;CL:0002593,1.07e-07,2;CL:0000327,3.29e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.10e-07!83;UBERON:0002329!1.10e-07!83;UBERON:0003077!1.10e-07!83;UBERON:0003059!1.10e-07!83;UBERON:0007282!1.10e-07!83;UBERON:0009618!1.10e-07!83;UBERON:0007285!1.10e-07!83;UBERON:0003688!3.38e-07!6;UBERON:0002358!3.38e-07!6;UBERON:0003684!3.38e-07!6;UBERON:0001178!3.38e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.53e-14;6!UBERON:0002358;2.53e-14;6!UBERON:0003684;2.53e-14;6!UBERON:0001178;2.53e-14;6!UBERON:0004457;3.40e-13;9!UBERON:0000042;3.40e-13;9!UBERON:0001708;6.66e-08;4!UBERON:0008895;6.66e-08;4!UBERON:0002456;6.93e-08;2!UBERON:0003104;7.73e-08;7!UBERON:0009142;7.73e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.74e-14,6;UBERON:0002358,4.74e-14,6;UBERON:0003684,4.74e-14,6;UBERON:0001178,4.74e-14,6;UBERON:0004457,1.93e-09,12;UBERON:0000042,1.93e-09,12;UBERON:0001708,4.54e-08,4;UBERON:0008895,4.54e-08,4;UBERON:0002456,1.07e-07,2 | |||
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| ||
|short_description=p@chr7:41728212..41728233,- | |||
}} | }} |
Latest revision as of 10:01, 31 July 2015
Short description: | p@chr7:41728212..41728233, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:41728212..41728233, - |
Coexpression cluster: | C775_hepatic_Preadipocyte_Mallassezderived_mesenchymal_Smooth_spindle_pagetoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.61e-13 | 12 |
adipocyte of omentum tissue | 4.43e-10 | 3 |
chondroblast | 4.19e-09 | 6 |
chondrocyte | 4.19e-09 | 6 |
GAG secreting cell | 6.65e-09 | 9 |
carbohydrate secreting cell | 6.65e-09 | 9 |
subcutaneous preadipocyte | 8.73e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 1.07e-07 | 2 |
extracellular matrix secreting cell | 3.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.74e-14 | 6 |
peritoneum | 4.74e-14 | 6 |
abdominal cavity | 4.74e-14 | 6 |
visceral peritoneum | 4.74e-14 | 6 |
cavity lining | 1.93e-09 | 12 |
serous membrane | 1.93e-09 | 12 |
jaw skeleton | 4.54e-08 | 4 |
splanchnocranium | 4.54e-08 | 4 |
internal thoracic artery | 1.07e-07 | 2 |