FFCP PHASE1:Hg19::chr7:37956409..37956427,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:37956409..37956427,- to FFCP PHASE1:Hg19::chr7:37956409..37956427,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6424 | |EntrezGene=6424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10778 | |HGNC=10778 | ||
|TSSclassifier=strong | |||
|UniProt=B4E1T4 | |UniProt=B4E1T4 | ||
|association_with_transcript=0bp_to_ENST00000446575_5end | |||
|cluster_id=chr7:37956409..37956427,- | |||
|coexpression_cluster_id=C1538 | |||
|description=CAGE_peak_1_at_SFRP4_5end | |||
|id=chr7:37956409..37956427,- | |||
|ontology_enrichment_celltype=CL:0000055!7.88e-11!180;CL:0000136!2.66e-10!15;CL:0000680!4.60e-09!57;CL:0000056!4.60e-09!57;CL:0000355!4.60e-09!57;CL:0000393!7.34e-09!60;CL:0000211!7.34e-09!60;CL:0002494!2.57e-08!16;CL:0000187!3.84e-08!54;CL:0000359!5.24e-08!32;CL:0000183!6.42e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.56e-11;13!CL:0002494;3.45e-08;16!CL:0000359;1.11e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.16e-12,15;CL:0002494,3.62e-08,16;CL:0000359,8.14e-08,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-21!115;UBERON:0007100!5.22e-13!27;UBERON:0000948!2.15e-12!24;UBERON:0005498!2.15e-12!24;UBERON:0004140!2.15e-12!24;UBERON:0009881!2.15e-12!24;UBERON:0004141!2.15e-12!24;UBERON:0003084!2.15e-12!24;UBERON:0007005!2.15e-12!24;UBERON:0004139!2.15e-12!24;UBERON:0004291!2.15e-12!24;UBERON:0003075!3.19e-11!86;UBERON:0007284!3.19e-11!86;UBERON:0004872!5.10e-11!84;UBERON:0002385!1.63e-10!63;UBERON:0001015!1.63e-10!63;UBERON:0000383!1.63e-10!63;UBERON:0002346!3.20e-10!90;UBERON:0005743!5.83e-10!86;UBERON:0001134!6.13e-10!61;UBERON:0002036!6.13e-10!61;UBERON:0003082!6.13e-10!61;UBERON:0000477!8.17e-10!286;UBERON:0001017!1.18e-09!82;UBERON:0001049!1.82e-09!57;UBERON:0005068!1.82e-09!57;UBERON:0006241!1.82e-09!57;UBERON:0007135!1.82e-09!57;UBERON:0000025!2.43e-09!194;UBERON:0004111!4.82e-09!241;UBERON:0000481!5.40e-09!347;UBERON:0002616!1.02e-08!59;UBERON:0000475!1.14e-08!365;UBERON:0004573!1.66e-08!33;UBERON:0004571!1.66e-08!33;UBERON:0001637!2.95e-08!42;UBERON:0003509!2.95e-08!42;UBERON:0004572!2.95e-08!42;UBERON:0000479!5.61e-08!787;UBERON:0000073!7.16e-08!94;UBERON:0001016!7.16e-08!94;UBERON:0000483!1.55e-07!309;UBERON:0000119!1.55e-07!312;UBERON:0001009!1.88e-07!113;UBERON:0000955!2.68e-07!69;UBERON:0006238!2.68e-07!69;UBERON:0004290!3.87e-07!70;UBERON:0000468!4.40e-07!659;UBERON:0004535!6.64e-07!110;UBERON:0003103!9.85e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.08e-11;22!UBERON:0007100;1.50e-11;25!UBERON:0004457;3.21e-08;9!UBERON:0000042;3.21e-08;9!UBERON:0003688;1.43e-07;6!UBERON:0002358;1.43e-07;6!UBERON:0003684;1.43e-07;6!UBERON:0001178;1.43e-07;6!UBERON:0004573;2.69e-07;33!UBERON:0004571;2.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.68e-14,114;UBERON:0000948,4.02e-13,24;UBERON:0005498,4.02e-13,24;UBERON:0004140,4.02e-13,24;UBERON:0009881,4.02e-13,24;UBERON:0004141,4.02e-13,24;UBERON:0003084,4.02e-13,24;UBERON:0007005,4.02e-13,24;UBERON:0004139,4.02e-13,24;UBERON:0004291,4.02e-13,24;UBERON:0007100,5.56e-13,27;UBERON:0004872,7.19e-11,83;UBERON:0004573,2.05e-08,33;UBERON:0004571,2.05e-08,33;UBERON:0002385,2.36e-08,64;UBERON:0001015,2.36e-08,64;UBERON:0000383,2.36e-08,64;UBERON:0003103,2.49e-08,68;UBERON:0004457,2.70e-08,12;UBERON:0000042,2.70e-08,12;UBERON:0001637,2.94e-08,42;UBERON:0003509,2.94e-08,42;UBERON:0004572,2.94e-08,42;UBERON:0010314,6.96e-08,132;UBERON:0001009,9.53e-08,112;UBERON:0001134,9.67e-08,62;UBERON:0002036,9.67e-08,62;UBERON:0003082,9.67e-08,62;UBERON:0003688,1.43e-07,6;UBERON:0002358,1.43e-07,6;UBERON:0003684,1.43e-07,6;UBERON:0001178,1.43e-07,6;UBERON:0004797,1.50e-07,7;UBERON:0004535,1.84e-07,109;UBERON:0000479,1.89e-07,773 | |||
|phase1_expression=394.78711815492,35.1124859181212,559.025166644622,114.083560122569,486.293670736889,1711.52818428492,7.59899634504932,2.52687949370732,4.17897005119742,0,0,0,0,0.37129905888014,1.98838425436749,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,8.37223194922158,11.2200380184339,48.2720271076255,14.3117993565528,1.23186982565596,1.00434111675842,0.0764134057479513,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,7.20194031091441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,13.4140171940727,25.0610621213319,12.2889311810753,21.0561922467074,36.3564762591668,2.3858578411533,1.94653948121054,1.22895262313288,1.33037638477538,2.3715392137144,69.8118472402808,0,0,1.62273696827342,0.174129737299267,2.6591592103773,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,4.47274756525787,90.0342937935162,358.431652461383,560.191920322433,146.83271023012,19.6237160049807,13.8773694448616,37.2467998109911,2.17847724779836,0.538842688278752,0.817309515567294,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,2.22540236350701,0,0.718618141816238,0,0,0,3.07284334616587,2.14541457059314,86.2366458123866,22.3461400825241,0,0,0,0,0,0,0.558350568994769,0,0,0,0,28.6113520569297,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,2.05881372358231,0,0,0,0,0,0,7.21656710126366,0.115930404975077,13.2671824486478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,3.4214489204541,0,0,0,0,116.837298447319,0,1.16344544182,0,0,10.9034627799797,2.08014873822732,0.257207374262142,0,0,0.57191197463259,0,0,0.325736184293735,0,0,91.6375706261142,71.4657436052241,138.162673813603,0,0,0,0.958499421966331,1.14861935834114,2.85273810081437,9.84512885339539,3.28762116080613,6.44619467663624,0,0,0,0,2.54094624222463,0,20.8787979449978,4.35542289869307,15.3105300396759,0,0,0,20.6121706088155,14.5049451107306,24.4138521329762,0.831883446123229,0,0,0,4.21324539618807,213.763053812626,8.27784570340039,0,0.184369168541703,0.347534457872331,0.195801157462741,5.83343820478455,0,0,0,0,0,0.30239029332968,626.224106934593,43.7366623870978,89.2499100297174,943.872973417493,465.6535966507,1226.51114872001,722.795983587106,0.154209693802656,2.84098760501003,1.88892458831761,0,0.348631135379878,0,0,0,0.918515585316854,2.54927635209404,52.7120148136885,0.451199612907412,0,0,0,0,0,0,0,0,0,1.50506932156456,0,0,0,0,0,0,0.328014645699706,0.325378394664303,8.86152700170411,0.0915694648183434,0,0,0,374.393556536892,0.773365746336976,0,0,0.413509717453592,0.214840489736547,0.580066775656914,3.32383846922794,30.9831484050646,0,0,0,0,1.39453664789186,18.8887408098384,0,20.946283451974,61.2151934864575,0,2.22389062924704,18.7493601632009,0,9.8077621662805,4.5751246541718,0,0,21.6378208589637,11.7742296029885,0.359744915166629,1.92175920815238,0.942499218765491,52.5674452090622,53.8935091988228,29.0668334804897,0,279.051945627821,7.39551027297288,3.41249778519964,0.707027159768564,54.2438959777165,13.7841335886531,104.823358088113,59.190869509258,0,0,0,13.9420574144888,4.22543403798362,0,0,0.35667105148125,0,531.991240950114,1287.54303147322,0,0,0,4.69211592875051,0,10.2616742846689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,7.91144168068228,12.6214942619494,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,55.9886846985506,2.76283915531148,0,0,0.369254416383208,0,0,0,0,35.0184090011114,0,0,0.969332746095218,0.74214478529481,3.99227596002388,0,0,17.399989810435,0,0,0,0,0,0,2.65722415744152,0.241192877250816,0,0.110579259931225,0.886642856860642,6.3621765174652,0,0,628.144960166495,11.0523794171591,0,0,0,0.31900115973192,0.274792780205587,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,9.95261931078505,2.12298154808014,2.4441205797345,16.9017043347955,20.635177804066,28.9248800130111,5.99870083528026,142.858821219184,0.937057782901357,0,0,0,22.4913109624153,10.8891644443797,0.30607276163049,118.538023383043,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,47.3509270935902,3.43972064943233,0,0,0,12.5115831270061,0,246.770968932341,0,0,1.13959432720582,0,0,4.69596588426576,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0,0,0,1.20084057741958,0.273810757783986,0,336.506340631826,0,100.541664458012,19.2494756169814,20.1004446881508,0.998395002494955,1.71690419254628,6.69514372325618,3.76227445925667,2.16179930125442,0,0,0,0.202210631562555,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,0.546746009922222,0,4.1767024868575,3.51445740504487,0,0,0,37.1641569714151,3.31045985182716,0,20.0909852648874,11.2348793856165,3.91904832131291,0,0,1.02232813071253,0,0,0,1.0342636508924,1.32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| ||
|short_description=p1@SFRP4 | |||
}} | }} |
Latest revision as of 11:51, 18 September 2015
Short description: | p1@SFRP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFRP4_5end |
Coexpression cluster: | C1538_Adipocyte_Synoviocyte_Preadipocyte_tenocyte_cervix_Fibroblast_retina |
Association with transcript: | 0bp_to_ENST00000446575_5end |
EntrezGene: | SFRP4 |
HGNC: | 10778 |
UniProt: | B4E1T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.16e-12 | 15 |
cardiocyte | 3.62e-08 | 16 |
vascular associated smooth muscle cell | 8.14e-08 | 32 |