FFCP PHASE1:Hg19::chr7:24797032..24797090,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:24797032..24797090,- to FFCP PHASE1:Hg19::chr7:24797032..24797090,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1687 | |EntrezGene=1687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2810 | |HGNC=2810 | ||
|TSSclassifier=strong | |||
|UniProt=O60443,A4FVA8 | |UniProt=O60443,A4FVA8 | ||
|association_with_transcript=0bp_to_NM_001127453,uc003swz.2,uc010kus.1_5end | |||
|cluster_id=chr7:24797032..24797090,- | |||
|description=CAGE_peak_1_at_DFNA5_5end | |||
|id=chr7:24797032..24797090,- | |||
|ontology_enrichment_celltype=CL:0000220!4.16e-24!246;CL:0002321!1.32e-23!248;CL:0000222!8.96e-18!119;CL:0000055!3.70e-16!180;CL:0000066!2.16e-12!254;CL:0000183!3.84e-10!59;CL:0000187!6.09e-10!54;CL:0000144!7.97e-10!625;CL:0000680!9.47e-10!57;CL:0000056!9.47e-10!57;CL:0000355!9.47e-10!57;CL:0002371!2.07e-09!591;CL:0000192!2.54e-09!42;CL:0000514!2.54e-09!42;CL:0000076!8.97e-09!62;CL:0000548!8.99e-09!679;CL:0000004!8.99e-09!679;CL:0000255!8.99e-09!679;CL:0000057!1.78e-08!75;CL:0000012!5.52e-08!682;CL:0000393!1.00e-07!60;CL:0000211!1.00e-07!60;CL:0000359!1.85e-07!32;CL:0000213!2.52e-07!57;CL:0000215!2.52e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.23e-07;43!CL:0000359;4.60e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.38e-23,250;CL:0000222,1.72e-18,121;CL:0000066,5.64e-12,253;CL:0000187,2.83e-10,55;CL:0000680,4.46e-10,58;CL:0000056,4.46e-10,58;CL:0000355,4.46e-10,58;CL:0000192,1.19e-09,43;CL:0000514,1.19e-09,43;CL:0000057,5.26e-09,76;CL:0000076,6.97e-09,63;CL:0000213,1.26e-07,58;CL:0000215,1.26e-07,58;CL:0000393,1.30e-07,61;CL:0000211,1.30e-07,61;CL:0000359,1.62e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.23e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.09e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.24e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.51e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.72e-18!659;UBERON:0000467!3.68e-18!625;UBERON:0000480!8.65e-18!626;UBERON:0000475!2.52e-16!365;UBERON:0000483!3.61e-14!309;UBERON:0000119!7.21e-14!312;UBERON:0000923!1.98e-13!604;UBERON:0005291!1.98e-13!604;UBERON:0006598!1.98e-13!604;UBERON:0002532!1.98e-13!604;UBERON:0002050!2.10e-13!605;UBERON:0005423!2.10e-13!605;UBERON:0000922!2.05e-12!612;UBERON:0005256!2.45e-12!143;UBERON:0002100!4.15e-12!216;UBERON:0000481!9.96e-11!347;UBERON:0004111!2.66e-10!241;UBERON:0000062!6.42e-10!511;UBERON:0000486!6.47e-10!82;UBERON:0000914!6.66e-10!83;UBERON:0002329!6.66e-10!83;UBERON:0003077!6.66e-10!83;UBERON:0003059!6.66e-10!83;UBERON:0007282!6.66e-10!83;UBERON:0009618!6.66e-10!83;UBERON:0007285!6.66e-10!83;UBERON:0003914!3.07e-09!118;UBERON:0002049!4.82e-09!79;UBERON:0007798!4.82e-09!79;UBERON:0000477!6.56e-09!286;UBERON:0004872!7.25e-09!84;UBERON:0002385!7.34e-09!63;UBERON:0001015!7.34e-09!63;UBERON:0000383!7.34e-09!63;UBERON:0000055!1.08e-08!69;UBERON:0001134!1.52e-08!61;UBERON:0002036!1.52e-08!61;UBERON:0003082!1.52e-08!61;UBERON:0000490!3.82e-08!138;UBERON:0001981!8.06e-08!60;UBERON:0007500!8.06e-08!60;UBERON:0004537!8.06e-08!60;UBERON:0006965!8.06e-08!60;UBERON:0004290!1.36e-07!70;UBERON:0000025!1.97e-07!194;UBERON:0003104!2.15e-07!238;UBERON:0009142!2.15e-07!238;UBERON:0003102!2.22e-07!95;UBERON:0001637!2.71e-07!42;UBERON:0003509!2.71e-07!42;UBERON:0004572!2.71e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,2.52e-14,306;UBERON:0000119,5.09e-14,309;UBERON:0005423,3.03e-11,581;UBERON:0000922,7.91e-11,592;UBERON:0004111,2.11e-10,240;UBERON:0000486,4.48e-10,83;UBERON:0002050,8.06e-10,564;UBERON:0002100,1.17e-09,199;UBERON:0003104,1.46e-09,160;UBERON:0009142,1.46e-09,160;UBERON:0003914,3.86e-09,117;UBERON:0002385,4.64e-09,64;UBERON:0001015,4.64e-09,64;UBERON:0000383,4.64e-09,64;UBERON:0000923,4.90e-09,560;UBERON:0010316,4.90e-09,560;UBERON:0005291,4.90e-09,560;UBERON:0006598,4.90e-09,560;UBERON:0010317,4.90e-09,560;UBERON:0002532,4.90e-09,560;UBERON:0001134,9.69e-09,62;UBERON:0002036,9.69e-09,62;UBERON:0003082,9.69e-09,62;UBERON:0002049,1.07e-08,78;UBERON:0007798,1.07e-08,78;UBERON:0004872,1.43e-08,83;UBERON:0007503,1.46e-08,78;UBERON:0000055,2.23e-08,68;UBERON:0003102,4.19e-08,99;UBERON:0005256,4.67e-08,122;UBERON:0000490,7.34e-08,148;UBERON:0007524,8.86e-08,73;UBERON:0002329,8.90e-08,71;UBERON:0003059,8.90e-08,71;UBERON:0007282,8.90e-08,71;UBERON:0004290,8.90e-08,71;UBERON:0009618,8.90e-08,71;UBERON:0003077,1.57e-07,72;UBERON:0007285,1.57e-07,72;UBERON:0007500,1.87e-07,59;UBERON:0001981,1.87e-07,59;UBERON:0004537,1.87e-07,59;UBERON:0006965,1.87e-07,59;UBERON:0000025,1.95e-07,192;UBERON:0001637,2.39e-07,42;UBERON:0003509,2.39e-07,42;UBERON:0004572,2.39e-07,42 | |||
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| ||
|short_description=p1@DFNA5 | |||
}} | }} |
Latest revision as of 21:38, 17 September 2015
Short description: | p1@DFNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DFNA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001127453, uc003swz.2, uc010kus.1_5end |
EntrezGene: | DFNA5 |
HGNC: | 2810 |
UniProt: | O60443A4FVA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.38e-23 | 250 |
mesodermal cell | 1.72e-18 | 121 |
epithelial cell | 5.64e-12 | 253 |
muscle cell | 2.83e-10 | 55 |
muscle precursor cell | 4.46e-10 | 58 |
myoblast | 4.46e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.46e-10 | 58 |
smooth muscle cell | 1.19e-09 | 43 |
smooth muscle myoblast | 1.19e-09 | 43 |
fibroblast | 5.26e-09 | 76 |
squamous epithelial cell | 6.97e-09 | 63 |
lining cell | 1.26e-07 | 58 |
barrier cell | 1.26e-07 | 58 |
electrically responsive cell | 1.30e-07 | 61 |
electrically active cell | 1.30e-07 | 61 |
vascular associated smooth muscle cell | 1.62e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.51e-07 | 14 |