FFCP PHASE1:Hg19::chr7:18548912..18548923,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:18548912..18548923,+ to FFCP PHASE1:Hg19::chr7:18548912..18548923,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9734 | |EntrezGene=9734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |HGNC=14065 | ||
|TSSclassifier=strong | |||
|UniProt=E7EX34,B7Z928,B7Z940,Q9UKV0,C9JS87 | |UniProt=E7EX34,B7Z928,B7Z940,Q9UKV0,C9JS87 | ||
|association_with_transcript=-12bp_to_,12bp_to_ENST00000524023,NM_001204147,NM_001204148,uc011jye.1,uc011jyf.1_5end | |||
|cluster_id=chr7:18548912..18548923,+ | |||
|coexpression_cluster_id=C2888 | |||
|description=CAGE_peak_11_at_HDAC9_5end | |||
|id=chr7:18548912..18548923,+ | |||
|ontology_enrichment_celltype=CL:0000012!3.59e-14!682;CL:0000548!5.08e-14!679;CL:0000004!5.08e-14!679;CL:0000255!5.08e-14!679;CL:0000220!1.30e-09!246;CL:0002321!2.62e-09!248;CL:0000003!3.97e-09!722;CL:0000066!2.06e-08!254;CL:0000144!2.23e-08!625;CL:0000063!4.70e-08!578;CL:0002371!1.17e-07!591;CL:0005020!7.73e-07!6;CL:0002138!7.73e-07!6;CL:0005022!7.73e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;5.59e-15;6!CL:0002621;1.14e-08;3!CL:0002166;1.50e-07;3!CL:0000860;4.18e-07;33!CL:0002057;4.18e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,5.57e-15,6;CL:0002138,5.57e-15,6;CL:0005022,5.57e-15,6;CL:0002621,9.21e-09,3;CL:0000860,8.57e-08,42;CL:0002057,8.57e-08,42;CL:0002166,1.20e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;5.59e-15;6 | |||
|ontology_enrichment_disease=DOID:2394!3.72e-08!14;DOID:120!7.35e-08!27;DOID:1749!2.42e-07!14;DOID:193!7.11e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.58e-07;14!DOID:120;5.99e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.43e-07,14;DOID:120,6.72e-07,27 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.14e-11;8!UBERON:0004536;5.14e-11;8!UBERON:0006558;5.14e-11;8!UBERON:0001949;1.14e-08;3!UBERON:0002465;1.23e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.13e-11,8;UBERON:0004536,5.13e-11,8;UBERON:0006558,5.13e-11,8;UBERON:0001949,9.21e-09,3;UBERON:0002465,1.22e-08,10 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,2.01697543935533,1.20538905604795,1.46062018077475,1.46379839637152,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,1.66198622559563,0.401088894940283,1.30206522429511,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0.768482119587302,1.41889337933151,1.37898272294647,4.51839278508678,1.35426486594342,0,0,0,1.53041946185451,1.28371610830437,1.27867425159808,0,0.398927315243264,0,2.03146467040009,2.8369261234557,3.11411124497787,0.75374599577023,0,0.217188844705117,0,2.20966581592539,4.74693581161327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0,0,0,0.567208902984407,1.33037638477538,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,1.55050055501597,3.20189636418039,2.00832367658802,0.402829317109147,0,0.488124115096339,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,15.2270557935202,0.286836620748814,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0,0,0.312160076830321,0.570471821544449,0,0,0,0.421352420106746,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,1.61450672119976,0,0.211931901159562,0.300091096084402,0.412210116953756,1.28820270022815,0.18611685633159,0.843881661206331,0.389748020644795,1.26216887122057,0.184099797284599,0,1.42003837006646,0.503760491138201,0.169560592310488,3.67195621010264,2.72746120590835,5.16248271700207,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.329250856225877,1.1240175325762,0.502644862058154,0,0,0,2.88662684050547,0.927443239800615,0.234817388471643,4.18662698507114,2.31492756288305,3.04406643575357,0,0,0,0,0,1.87467667973554,2.01578553838631,1.27597587518148,0.447792613514241,0.290633938513962,0,0,0,0,0.144119953416961,0,0.190493682876507,1.14596527667483,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,1.50719688529793,0,0.599837947092342,0,0,0,1.4377491329495,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,2.6065841139427,0.460404944679482,0.114814448164607,0.182091168006717,0.131124414959424,0,0.693138033939733,0,0,0.633309773357254,2.27466768141793,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0.384380134730212,3.57315594984836,0.30347334256665,0,0.62962469366128,0,0,2.12922412126809,0,1.11194531462352,2.14687330112987,0,0.632758849437452,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.808729926293264,1.58510321173008,0.421258456238981,0,0.974853958525138,0,0.136499911407986,0,0,0,0.66343897524122,1.75380354101505,0,0,0.202910376962704,0.30982349809975,0,0.573645408816206,0,0.35667105148125,0.709522128141196,0,0.329294892959902,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0.23874448473769,0,0,0,0,1.22439575525196,0,0,0.19924798825107,0,0,0.715880777515084,0,1.55519793830904,1.79736702294654,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,1.70690172428249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0.957003479195758,0.366390373607449,0,0,0,0,0,0,0,0.189753732724185,0,1.47698645169619,18.6085401301428,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0,0.150323419414493,0,0,0.661983911750998,0.313932918407225,0,0.853828638089378,0.138674673013139,0.173559738335131,1.27390116638691,0.870592065804026,0,0.171986032471617,0,0,0,0,0.794305140223502,0,0.822251547880505,0,0,0.391102765469606,1.04206466326994,0,0,0,0,0,0.432164393964449,0.745515213392595,0,0.543616824294456,0.313808538937,0.509991088181609,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0.899895566206002,0,0,0.335434687599266,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,1.19271615249795,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0.499921631848426,0.454947352624943,0,0,0,0,0,0,0,0.189403005275089,1.0062716070103,0,1.37304041038154,0.604923695052956,0.310874401165561,1.18284119991707,1.43367090447332,2.24901556081802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| ||
|short_description=p11@HDAC9 | |||
}} | }} |
Latest revision as of 14:22, 17 September 2015
Short description: | p11@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_HDAC9_5end |
Coexpression cluster: | C2888_clear_Fibroblast_papillotubular_transitionalcell_malignant_schwannoma_squamous |
Association with transcript: | -12bp_to_, 12bp_to_ENST00000524023, NM_001204147, NM_001204148, uc011jye.1, uc011jyf.1_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | E7EX34B7Z928B7Z940Q9UKV0C9JS87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 5.57e-15 | 6 |
endothelial cell of lymphatic vessel | 5.57e-15 | 6 |
vascular lymphangioblast | 5.57e-15 | 6 |
gingival epithelial cell | 9.21e-09 | 3 |
classical monocyte | 8.57e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.57e-08 | 42 |
epithelial cell of Malassez | 1.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 5.13e-11 | 8 |
lymph vasculature | 5.13e-11 | 8 |
lymphatic part of lymphoid system | 5.13e-11 | 8 |
gingival epithelium | 9.21e-09 | 3 |
lymphoid system | 1.22e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.43e-07 | 14 |
female reproductive organ cancer | 6.72e-07 | 27 |