FFCP PHASE1:Hg19::chr7:100273736..100273769,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100273736..100273769,+ to FFCP PHASE1:Hg19::chr7:100273736..100273769,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2783 | |EntrezGene=2783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4398 | |HGNC=4398 | ||
|TSSclassifier=strong | |||
|UniProt=P62879,C9JZN1 | |UniProt=P62879,C9JZN1 | ||
|association_with_transcript=0bp_to_ENST00000393924,ENST00000412215,uc003uwe.2_5end | |||
|cluster_id=chr7:100273736..100273769,+ | |||
|description=CAGE_peak_4_at_GNB2_5end | |||
|id=chr7:100273736..100273769,+ | |||
|ontology_enrichment_celltype=CL:0000183!1.83e-18!59;CL:0002371!9.36e-18!591;CL:0000393!1.03e-17!60;CL:0000211!1.03e-17!60;CL:0000055!2.17e-17!180;CL:0000222!5.10e-17!119;CL:0000187!5.41e-17!54;CL:0000144!1.67e-16!625;CL:0000680!4.41e-16!57;CL:0000056!4.41e-16!57;CL:0000355!4.41e-16!57;CL:0000192!1.81e-15!42;CL:0000514!1.81e-15!42;CL:0000003!1.83e-12!722;CL:0000359!1.06e-11!32;CL:0002321!3.93e-11!248;CL:0000220!4.62e-11!246;CL:0000548!2.56e-08!679;CL:0000004!2.56e-08!679;CL:0000255!2.56e-08!679;CL:0000012!3.47e-08!682;CL:0000034!6.32e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.45e-11;43!CL:0000359;5.19e-11;32!CL:0000187;8.12e-10;55!CL:0000393;2.19e-09;61!CL:0000211;2.19e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.99e-18,61;CL:0000211,2.99e-18,61;CL:0000222,8.54e-18,121;CL:0000187,1.71e-17,55;CL:0000680,2.52e-16,58;CL:0000056,2.52e-16,58;CL:0000355,2.52e-16,58;CL:0000192,6.89e-16,43;CL:0000514,6.89e-16,43;CL:0002321,1.55e-12,250;CL:0000359,4.84e-12,32;CL:0000034,7.56e-08,441;CL:0000723,1.44e-07,433;CL:0000048,2.20e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;2.45e-11;43!CL:0000355;1.64e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.27e-15!110;UBERON:0002049!7.03e-15!79;UBERON:0007798!7.03e-15!79;UBERON:0000914!1.18e-14!83;UBERON:0002329!1.18e-14!83;UBERON:0003077!1.18e-14!83;UBERON:0003059!1.18e-14!83;UBERON:0007282!1.18e-14!83;UBERON:0009618!1.18e-14!83;UBERON:0007285!1.18e-14!83;UBERON:0004290!1.63e-14!70;UBERON:0001009!2.26e-14!113;UBERON:0001134!1.26e-13!61;UBERON:0002036!1.26e-13!61;UBERON:0003082!1.26e-13!61;UBERON:0004872!2.76e-13!84;UBERON:0001981!3.18e-13!60;UBERON:0007500!3.18e-13!60;UBERON:0004537!3.18e-13!60;UBERON:0006965!3.18e-13!60;UBERON:0001637!5.96e-13!42;UBERON:0003509!5.96e-13!42;UBERON:0004572!5.96e-13!42;UBERON:0000055!1.51e-12!69;UBERON:0002385!1.55e-12!63;UBERON:0001015!1.55e-12!63;UBERON:0000383!1.55e-12!63;UBERON:0000486!3.62e-12!82;UBERON:0003914!2.03e-10!118;UBERON:0005256!2.23e-09!143;UBERON:0004573!2.89e-09!33;UBERON:0004571!2.89e-09!33;UBERON:0003081!4.92e-08!216;UBERON:0000490!7.93e-08!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.45e-09;42!UBERON:0003509;2.45e-09;42!UBERON:0004572;2.45e-09;42!UBERON:0007500;1.98e-08;56!UBERON:0001981;1.98e-08;56!UBERON:0004537;1.98e-08;56!UBERON:0003914;2.03e-08;74!UBERON:0004573;2.29e-08;33!UBERON:0004571;2.29e-08;33!UBERON:0002049;5.37e-07;75!UBERON:0007798;5.37e-07;75!UBERON:0000055;9.52e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.66e-17,78;UBERON:0004535,1.31e-15,109;UBERON:0002049,2.21e-15,78;UBERON:0007798,2.21e-15,78;UBERON:0002329,1.30e-14,71;UBERON:0003059,1.30e-14,71;UBERON:0007282,1.30e-14,71;UBERON:0004290,1.30e-14,71;UBERON:0009618,1.30e-14,71;UBERON:0007524,1.96e-14,73;UBERON:0003077,2.71e-14,72;UBERON:0007285,2.71e-14,72;UBERON:0001009,4.37e-14,112;UBERON:0007500,1.08e-13,59;UBERON:0001981,1.08e-13,59;UBERON:0004537,1.08e-13,59;UBERON:0006965,1.08e-13,59;UBERON:0001134,1.11e-13,62;UBERON:0002036,1.11e-13,62;UBERON:0003082,1.11e-13,62;UBERON:0004872,2.74e-13,83;UBERON:0001637,3.31e-13,42;UBERON:0003509,3.31e-13,42;UBERON:0004572,3.31e-13,42;UBERON:0000055,4.29e-13,68;UBERON:0002385,2.24e-12,64;UBERON:0001015,2.24e-12,64;UBERON:0000383,2.24e-12,64;UBERON:0000486,8.38e-12,83;UBERON:0003914,1.30e-10,117;UBERON:0004573,2.08e-09,33;UBERON:0004571,2.08e-09,33;UBERON:0000490,2.12e-09,148;UBERON:0000926,9.82e-08,315;UBERON:0004120,9.82e-08,315;UBERON:0006603,9.82e-08,315;UBERON:0003104,1.43e-07,160;UBERON:0009142,1.43e-07,160;UBERON:0003081,2.30e-07,203;UBERON:0005256,5.62e-07,122;UBERON:0000483,7.24e-07,306 | |||
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| ||
|short_description=p4@GNB2 | |||
}} | }} |
Latest revision as of 08:37, 20 September 2015
Short description: | p4@GNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393924, ENST00000412215, uc003uwe.2_5end |
EntrezGene: | GNB2 |
HGNC: | 4398 |
UniProt: | P62879C9JZN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.99e-18 | 61 |
electrically active cell | 2.99e-18 | 61 |
mesodermal cell | 8.54e-18 | 121 |
muscle cell | 1.71e-17 | 55 |
muscle precursor cell | 2.52e-16 | 58 |
myoblast | 2.52e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.52e-16 | 58 |
smooth muscle cell | 6.89e-16 | 43 |
smooth muscle myoblast | 6.89e-16 | 43 |
embryonic cell | 1.55e-12 | 250 |
vascular associated smooth muscle cell | 4.84e-12 | 32 |
stem cell | 7.56e-08 | 441 |
somatic stem cell | 1.44e-07 | 433 |
multi fate stem cell | 2.20e-07 | 427 |