FFCP PHASE1:Hg19::chr6:7579504..7579515,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:7579504..7579515,+ to FFCP PHASE1:Hg19::chr6:7579504..7579515,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=P15924 | |UniProt=P15924 | ||
|association_with_transcript=-267bp_to_J05211_5end | |||
|cluster_id=chr6:7579504..7579515,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_13_at_DSP_5end | |||
|id=chr6:7579504..7579515,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.15e-22!254;CL:0000223!9.07e-15!59;CL:0002076!5.32e-14!43;CL:0002251!2.14e-12!21 | |||
|ontology_enrichment_celltype_v019=CL:0002623;3.73e-18;3!CL:0000622;4.20e-11;5!CL:0002251;5.92e-10;20!CL:0000154;2.49e-09;6!CL:0000240;2.78e-09;6!CL:0000311;2.78e-09;6!CL:0000079;2.78e-09;6!CL:0000237;2.78e-09;6!CL:0002336;1.97e-07;1!CL:0002261;1.97e-07;1!CL:0002170;1.97e-07;1!CL:0000313;5.28e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.23e-18,3;CL:0000622,4.52e-11,5;CL:0002251,4.42e-10,20;CL:0000223,5.09e-10,58;CL:0000240,2.36e-09,6;CL:0000311,2.36e-09,6;CL:0000079,2.36e-09,6;CL:0000237,2.36e-09,6;CL:0000036,2.36e-09,6;CL:0000357,2.36e-09,6;CL:0000114,2.36e-09,6;CL:0000154,2.64e-09,6;CL:0002076,8.21e-08,42;CL:0002336,2.23e-07,1;CL:0002261,2.23e-07,1;CL:0002170,2.23e-07,1;CL:0000313,8.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;2.78e-09;6!CL:0000114;2.78e-09;6!CL:0000223;5.01e-07;58!UBERON:0008801;5.28e-07;1!UBERON:0010227;5.28e-07;1 | |||
|ontology_enrichment_disease=DOID:305!2.38e-16!106;DOID:0050687!3.29e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:178;1.97e-07;1!DOID:326;1.97e-07;1!DOID:3978;1.97e-07;1!DOID:3394;1.97e-07;1!DOID:5844;1.97e-07;1!DOID:1799;5.28e-07;1!DOID:10165;5.28e-07;1!DOID:2152;5.28e-07;1!DOID:1798;5.28e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.10e-07,1;DOID:326,2.10e-07,1;DOID:3978,2.10e-07,1;DOID:3394,2.10e-07,1;DOID:5844,2.10e-07,1;DOID:1799,5.78e-07,1;DOID:10165,5.78e-07,1;DOID:1798,5.78e-07,1;DOID:2152,8.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.45e-12!169;UBERON:0000925!1.45e-12!169;UBERON:0006595!1.45e-12!169;UBERON:0001007!1.01e-10!155;UBERON:0001555!1.01e-10!155;UBERON:0007026!1.01e-10!155;UBERON:0001004!1.49e-09!72;UBERON:0004921!4.94e-09!129;UBERON:0004185!4.94e-09!129;UBERON:0001041!2.52e-07!98;UBERON:0000166!5.31e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.08e-15;6!UBERON:0003293;1.08e-15;6!UBERON:0003294;1.08e-15;6!UBERON:0010047;1.08e-15;6!UBERON:0003408;1.08e-15;6!UBERON:0000167;1.08e-15;6!UBERON:0000165;3.86e-12;28!UBERON:0001041;3.86e-10;14!UBERON:0001723;8.54e-09;3!UBERON:0001033;8.54e-09;3!UBERON:0000161;2.10e-07;19!UBERON:0000166;2.10e-07;19!UBERON:0005795;5.28e-07;1!UBERON:0002079;5.28e-07;1!UBERON:0001831;5.28e-07;1!UBERON:0004911;5.28e-07;1!UBERON:0001567;5.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.62e-15,6;UBERON:0003293,1.62e-15,6;UBERON:0003294,1.62e-15,6;UBERON:0010047,1.62e-15,6;UBERON:0000167,1.62e-15,6;UBERON:0000166,4.72e-12,22;UBERON:0000165,1.16e-11,29;UBERON:0000930,1.16e-11,29;UBERON:0003408,2.30e-09,10;UBERON:0000161,3.38e-09,36;UBERON:0001723,9.09e-09,3;UBERON:0001033,9.09e-09,3;UBERON:0010056,9.09e-09,3;UBERON:0002079,3.40e-07,1;UBERON:0000033,7.33e-07,56;UBERON:0004911,8.18e-07,1;UBERON:0001831,8.67e-07,1;UBERON:0001567,8.67e-07,1;UBERON:0008801,8.67e-07,1 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0.243947412259191,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0.964044119533928,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.368965315629341,0,1.31700342490351,0,1.50793458617446,2.31471112896324,0,0,0,0.115930404975077,0,0,0,0.761016608938393,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.42743191037729,0.788512075169673,0.117141414992713,0,0,0,1.32845119707087,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0.804269605718038,0,0.308419387605311,0,0,0,0,0.120859449591622,0.40101294060657,7.4585601038076,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.991709492165869,0.384380134730212,0.255225424989168,1.4162089319777,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,2.45728561679386,0,0,0,0,0,0,0,2.77126022639704,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,1.41832609060762,0,0,0,0,0.120596438625408,0,0,0,0,0,1.39423744278603,0.307801034015188,0,0.23056390438806,0.897576444097721,2.49888955420619,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0.216388639742091,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0.587954384486266,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0.872901148395775,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0.599428828746391,1.72908500584927,0,0.343189995723929,0,0.124252535565433,1.88555227693436,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,2.39614800598789,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0.787831823072237,0.824158583811665,1.01105315781277,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.394028536495991,0,0.105600336519406,0,0.191915197319445,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.691743174681154,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0.97894681802587,0,0,0.219284049578707,0,0,0,0.512483037175893,0,0.303859956177382,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,1.83428598521679,0.808679663052368,0,0,0.198916222116275,0,0,0,1.30953347240711,0.655087670040387,0,0,0,0,0,0,1.09651553371436,0.992422356778588,0,0.383287282918786,0,0,0,0.682986574053893,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0.47404083519818,0,0,0,1.24329698497822,4.26796192734875,1.38251932362818,0,0,0,0,0.22910686854405,0,0,1.11855431797792,0.196300467230486,0,0,0,0,0.485710993059139,0,2.58636007709779,0.118920090777569,0.45178432815584,0.329821550236287,0.301925687133347,0.154348316215889,1.09279780251979,0.940634592723046,0.245148321753905,0,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0.432626562123789,0.252332849670158,0.327796715891087,0.126698501011437,0,0.534434810531121,0.18378979906969,1.25353769646188,0,0,0,0,0.639701945702943,0.476128862927481,0.129177819672012,0.0620747142958579,0,0.12729431655633,0.202117188958219,2.17716747896961,1.36893320434112,0.202056159043763,0.430333232356058,0,0,0,0,0.0898252021065869,0,0,1.22068853494722,0,0,0 | |phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0.243947412259191,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0.964044119533928,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.368965315629341,0,1.31700342490351,0,1.50793458617446,2.31471112896324,0,0,0,0.115930404975077,0,0,0,0.761016608938393,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.42743191037729,0.788512075169673,0.117141414992713,0,0,0,1.32845119707087,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0.804269605718038,0,0.308419387605311,0,0,0,0,0.120859449591622,0.40101294060657,7.4585601038076,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.991709492165869,0.384380134730212,0.255225424989168,1.4162089319777,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,2.45728561679386,0,0,0,0,0,0,0,2.77126022639704,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,1.41832609060762,0,0,0,0,0.120596438625408,0,0,0,0,0,1.39423744278603,0.307801034015188,0,0.23056390438806,0.897576444097721,2.49888955420619,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0.216388639742091,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0.587954384486266,0.0870592065804026,0,0,0.19351266257817,0.146178634172371,0.0821154570532092,0.872901148395775,0,0.451961481561065,0,0,0,0.195551382734803,0,0,0.599428828746391,1.72908500584927,0,0.343189995723929,0,0.124252535565433,1.88555227693436,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,2.39614800598789,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0.787831823072237,0.824158583811665,1.01105315781277,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0.394028536495991,0,0.105600336519406,0,0.191915197319445,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.691743174681154,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0.97894681802587,0,0,0.219284049578707,0,0,0,0.512483037175893,0,0.303859956177382,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,1.83428598521679,0.808679663052368,0,0,0.198916222116275,0,0,0,1.30953347240711,0.655087670040387,0,0,0,0,0,0,1.09651553371436,0.992422356778588,0,0.383287282918786,0,0,0,0.682986574053893,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0.47404083519818,0,0,0,1.24329698497822,4.26796192734875,1.38251932362818,0,0,0,0,0.22910686854405,0,0,1.11855431797792,0.196300467230486,0,0,0,0,0.485710993059139,0,2.58636007709779,0.118920090777569,0.45178432815584,0.329821550236287,0.301925687133347,0.154348316215889,1.09279780251979,0.940634592723046,0.245148321753905,0,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0.432626562123789,0.252332849670158,0.327796715891087,0.126698501011437,0,0.534434810531121,0.18378979906969,1.25353769646188,0,0,0,0,0.639701945702943,0.476128862927481,0.129177819672012,0.0620747142958579,0,0.12729431655633,0.202117188958219,2.17716747896961,1.36893320434112,0.202056159043763,0.430333232356058,0,0,0,0,0.0898252021065869,0,0,1.22068853494722,0,0,0 | ||
|short_description=p13@DSP | |||
}} | }} |
Latest revision as of 19:17, 19 September 2015
Short description: | p13@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DSP_5end |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | -267bp_to_J05211_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.23e-18 | 3 |
acinar cell | 4.52e-11 | 5 |
epithelial cell of alimentary canal | 4.42e-10 | 20 |
endodermal cell | 5.09e-10 | 58 |
stratified squamous epithelial cell | 2.36e-09 | 6 |
keratin accumulating cell | 2.36e-09 | 6 |
stratified epithelial cell | 2.36e-09 | 6 |
keratinizing barrier epithelial cell | 2.36e-09 | 6 |
epithelial fate stem cell | 2.36e-09 | 6 |
stratified epithelial stem cell | 2.36e-09 | 6 |
surface ectodermal cell | 2.36e-09 | 6 |
protein secreting cell | 2.64e-09 | 6 |
endo-epithelial cell | 8.21e-08 | 42 |
buccal mucosa cell | 2.23e-07 | 1 |
endothelial cell of viscerocranial mucosa | 2.23e-07 | 1 |
keratinized cell of the oral mucosa | 2.23e-07 | 1 |
serous secreting cell | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.62e-15 | 6 |
gland of oral region | 1.62e-15 | 6 |
gland of foregut | 1.62e-15 | 6 |
oral gland | 1.62e-15 | 6 |
oral cavity | 1.62e-15 | 6 |
oral opening | 4.72e-12 | 22 |
mouth | 1.16e-11 | 29 |
stomodeum | 1.16e-11 | 29 |
gland of gut | 2.30e-09 | 10 |
orifice | 3.38e-09 | 36 |
tongue | 9.09e-09 | 3 |
gustatory system | 9.09e-09 | 3 |
future tongue | 9.09e-09 | 3 |
left cardiac atrium | 3.40e-07 | 1 |
head | 7.33e-07 | 56 |
epithelium of female gonad | 8.18e-07 | 1 |
parotid gland | 8.67e-07 | 1 |
cheek | 8.67e-07 | 1 |
parotid gland primordium | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.10e-07 | 1 |
ischemia | 2.10e-07 | 1 |
extrinsic cardiomyopathy | 2.10e-07 | 1 |
myocardial ischemia | 2.10e-07 | 1 |
myocardial infarction | 2.10e-07 | 1 |
islet cell tumor | 5.78e-07 | 1 |
endocrine pancreas cancer | 5.78e-07 | 1 |
pancreatic endocrine carcinoma | 5.78e-07 | 1 |
ovary epithelial cancer | 8.18e-07 | 1 |