FFCP PHASE1:Hg19::chr6:41040678..41040722,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:41040678..41040722,+ to FFCP PHASE1:Hg19::chr6:41040678..41040722,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4800 | |EntrezGene=4800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7804 | |HGNC=7804 | ||
|TSSclassifier=strong | |||
|UniProt=P23511 | |UniProt=P23511 | ||
|association_with_transcript=0bp_to_ENST00000341376,ENST00000353205,NM_002505,NM_021705,uc003opo.2,uc003opp.2_5end | |||
|cluster_id=chr6:41040678..41040722,+ | |||
|description=CAGE_peak_1_at_NFYA_5end | |||
|id=chr6:41040678..41040722,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.85e-35!172;CL:0000566!9.85e-35!172;CL:0002032!4.05e-32!165;CL:0000837!4.05e-32!165;CL:0000988!8.83e-30!182;CL:0000738!8.13e-25!140;CL:0000763!3.52e-24!112;CL:0000049!3.52e-24!112;CL:0002031!2.63e-19!124;CL:0002087!4.69e-18!119;CL:0000766!3.92e-14!76;CL:0000557!2.06e-12!71;CL:0002057!6.64e-12!42;CL:0000839!1.01e-11!70;CL:0002009!5.81e-11!65;CL:0000860!6.44e-11!45;CL:0002194!1.84e-10!63;CL:0000576!1.84e-10!63;CL:0000040!1.84e-10!63;CL:0000559!1.84e-10!63;CL:0000838!1.29e-07!52;CL:0000542!1.35e-07!53;CL:0000051!1.35e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.22e-14;33!CL:0002057;7.22e-14;33!CL:0000473;7.01e-11;39!CL:0000234;7.01e-11;39!CL:0000763;3.00e-09;100!CL:0000576;1.72e-08;48!CL:0000766;1.49e-07;69!CL:0002087;6.67e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.62e-36,168;CL:0002032,1.61e-33,161;CL:0000837,1.61e-33,161;CL:0000988,2.41e-31,177;CL:0000738,3.92e-26,136;CL:0000763,1.01e-25,108;CL:0000049,1.01e-25,108;CL:0002031,1.67e-20,120;CL:0002087,3.15e-19,115;CL:0000766,1.65e-15,72;CL:0000557,1.02e-13,67;CL:0000839,5.54e-13,66;CL:0002009,3.15e-12,61;CL:0000860,6.64e-12,42;CL:0002057,6.64e-12,42;CL:0002194,1.04e-11,59;CL:0000576,1.04e-11,59;CL:0000040,1.04e-11,59;CL:0000559,1.04e-11,59;CL:0000473,3.83e-11,48;CL:0000234,3.83e-11,48;CL:0000838,1.29e-07,52;CL:0000542,1.35e-07,53;CL:0000051,1.35e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.58e-09;42!CL:0000049;8.19e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!1.79e-11!39;DOID:8692!3.15e-10!31;DOID:2531!1.16e-09!51;DOID:0060083!1.16e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.59e-10;31!DOID:1240;2.32e-09;39!DOID:2531;9.66e-07;51!DOID:0060083;9.66e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.79e-11,39;DOID:8692,3.15e-10,31;DOID:2531,1.16e-09,51;DOID:0060083,1.16e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.62e-12!102;UBERON:0003061!5.62e-12!102;UBERON:0002193!4.02e-10!112;UBERON:0001474!5.30e-10!86;UBERON:0002371!1.35e-09!80;UBERON:0004765!1.94e-07!101;UBERON:0001434!1.94e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.13e-13,98;UBERON:0003061,6.13e-13,98;UBERON:0001474,5.98e-11,82;UBERON:0002193,6.55e-11,108;UBERON:0002371,1.45e-10,76;UBERON:0004765,7.15e-10,90;UBERON:0002405,5.54e-09,93;UBERON:0001434,5.90e-08,100 | |||
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| ||
|short_description=p1@NFYA | |||
}} | }} |
Latest revision as of 18:07, 18 September 2015
Short description: | p1@NFYA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFYA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341376, ENST00000353205, NM_002505, NM_021705, uc003opo.2, uc003opp.2_5end |
EntrezGene: | NFYA |
HGNC: | 7804 |
UniProt: | P23511 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.62e-36 | 168 |
hematopoietic oligopotent progenitor cell | 1.61e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-33 | 161 |
hematopoietic cell | 2.41e-31 | 177 |
leukocyte | 3.92e-26 | 136 |
myeloid cell | 1.01e-25 | 108 |
common myeloid progenitor | 1.01e-25 | 108 |
hematopoietic lineage restricted progenitor cell | 1.67e-20 | 120 |
nongranular leukocyte | 3.15e-19 | 115 |
myeloid leukocyte | 1.65e-15 | 72 |
granulocyte monocyte progenitor cell | 1.02e-13 | 67 |
myeloid lineage restricted progenitor cell | 5.54e-13 | 66 |
macrophage dendritic cell progenitor | 3.15e-12 | 61 |
classical monocyte | 6.64e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.64e-12 | 42 |
monopoietic cell | 1.04e-11 | 59 |
monocyte | 1.04e-11 | 59 |
monoblast | 1.04e-11 | 59 |
promonocyte | 1.04e-11 | 59 |
defensive cell | 3.83e-11 | 48 |
phagocyte | 3.83e-11 | 48 |
lymphoid lineage restricted progenitor cell | 1.29e-07 | 52 |
lymphocyte | 1.35e-07 | 53 |
common lymphoid progenitor | 1.35e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-13 | 98 |
blood island | 6.13e-13 | 98 |
bone element | 5.98e-11 | 82 |
hemolymphoid system | 6.55e-11 | 108 |
bone marrow | 1.45e-10 | 76 |
skeletal element | 7.15e-10 | 90 |
immune system | 5.54e-09 | 93 |
skeletal system | 5.90e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.79e-11 | 39 |
myeloid leukemia | 3.15e-10 | 31 |
hematologic cancer | 1.16e-09 | 51 |
immune system cancer | 1.16e-09 | 51 |