FFCP PHASE1:Hg19::chr6:36644233..36644248,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:36644233..36644248,+ to FFCP PHASE1:Hg19::chr6:36644233..36644248,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1026 | |EntrezGene=1026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1784 | |HGNC=1784 | ||
|TSSclassifier=strong | |||
|UniProt=P38936,Q6FI05 | |UniProt=P38936,Q6FI05 | ||
|association_with_transcript=0bp_to_NM_001220777_5end | |||
|cluster_id=chr6:36644233..36644248,+ | |||
|description=CAGE_peak_3_at_CDKN1A_5end | |||
|id=chr6:36644233..36644248,+ | |||
|ontology_enrichment_celltype=CL:0000220!5.56e-18!246;CL:0002321!6.89e-18!248;CL:0000144!9.07e-14!625;CL:0000055!3.27e-13!180;CL:0000548!4.17e-12!679;CL:0000004!4.17e-12!679;CL:0000255!4.17e-12!679;CL:0000222!1.62e-11!119;CL:0000012!1.69e-11!682;CL:0002371!3.34e-10!591;CL:0000066!9.83e-10!254;CL:0000057!1.03e-08!75;CL:0000221!1.30e-07!71;CL:0000192!1.37e-07!42;CL:0000514!1.37e-07!42;CL:0000003!1.97e-07!722;CL:0000213!2.41e-07!57;CL:0000215!2.41e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.78e-12,253;CL:0002321,5.54e-12,250;CL:0000076,1.23e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.22e-10!79;UBERON:0007798!2.22e-10!79;UBERON:0004872!2.29e-09!84;UBERON:0000055!2.97e-09!69;UBERON:0001981!4.79e-08!60;UBERON:0007500!4.79e-08!60;UBERON:0004537!4.79e-08!60;UBERON:0006965!4.79e-08!60;UBERON:0005085!7.18e-08!29;UBERON:0001637!1.07e-07!42;UBERON:0003509!1.07e-07!42;UBERON:0004572!1.07e-07!42;UBERON:0001009!2.29e-07!113;UBERON:0004535!2.77e-07!110;UBERON:0000486!6.07e-07!82;UBERON:0000119!6.25e-07!312;UBERON:0000947!7.87e-07!21;UBERON:0010191!7.87e-07!21;UBERON:0004573!8.19e-07!33;UBERON:0004571!8.19e-07!33;UBERON:0000483!8.52e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.06e-07;24!UBERON:0000490;8.66e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,5.36e-08,83;UBERON:0000487,4.16e-07,22;UBERON:0000478,5.23e-07,24;UBERON:0005085,9.58e-07,31 | |||
|phase1_expression=0.181678379270557,1.49870366723688,3.66481450649525,0,1.34088328328186,2.61701557230111,0,0.631719873426831,0.783556884599516,2.45733936501509,2.09340350391728,1.31064823278103,0,0.123766352960047,1.32558950291166,3.36162573225888,3.01347264011988,2.92124036154949,2.92759679274304,0.61560529038394,1.02000345622126,0.940364164434263,0.286235987131057,0.273748850145768,0.502170558379211,1.68109492645493,0.57470412614962,0.787107813136792,0,0,0,1.83884244895785,0,1.47901604066715,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0.567208902984407,1.33037638477538,0.790513071238134,0.130979075497713,2.18577172975525,1.48313777113772,0.324547393654683,0.870648686496336,0.26591592103773,0,0,0,1.59009925893364,4.30117297553062,1.38856200643038,0,1.25849830862972,0.550236083880135,1.67195973229448,2.06733407335463,1.06729878806013,2.34304428935269,2.41697590265488,1.52054421143703,1.46437234528902,0.735326160691737,1.62028389576352,0.535798369704479,0,0.337834441449967,1.53316637465883,1.89853131913626,1.28241220751285,0,0,3.48875241714027,1.98788780678127,0.633152558322899,0.662045904066094,1.14734648299525,0.354668382198357,1.68203280042692,0,1.2333377420858,1.24484414159907,0.808264032418128,0.163461903113459,0.605429710579726,0,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0.469737994575059,0.323745888736263,0,0.816616685019573,0.122834317311768,0.929932030581889,1.18800285728205,0.989067717114227,0,2.15585442544872,0,0.125118519871964,1.10825646193673,0,0,0.600952235626387,0.226864366320042,0.717558542755448,2.98980344345994,0.635795703478686,0.300091096084402,0.618315175430633,1.54584324027377,1.67505170698431,0.843881661206331,0.779496041289589,0.252433774244115,1.19664868234989,0.80823028409406,1.77504796258307,1.20902517873168,1.3564847384839,0.57978255948989,0.818238361772504,0.860413786167011,0.975789649036763,0,0.464775771478074,1.7622379352613,0.756962552626885,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.928735856063958,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0,1.3725424823882,2.08525542276389,3.37205259772859,0.301586917234893,1.574003567695,0.977424915930974,2.07986957055916,1.44331342025273,1.73895607462615,5.16598254637615,0.721832238805369,0.462985512576611,0.761016608938393,0.790204397959275,0,0.492434012174795,0,0.445893486866185,0,2.51973192298289,1.41775097242386,2.05984602216551,3.77824120068151,1.15014803749563,0,0,0,0.144119953416961,0,0.126995788584338,3.4378958300245,0,0,0.822619941626588,4.80548892550268,0.857479297891735,0.448524337381443,0.43596006883328,0.36669142910475,4.91232519879556,3.57656445851882,0,1.59562869950922,0,0.771622122786426,0,1.3321108950805,0.857867961948885,1.08524321078289,1.64648067356154,0,0,0.791951872933429,2.71295439353627,0.871533458600294,2.29937879718731,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,2.03275699377971,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,1.08506009479894,0.207970861530807,0.713715955188647,2.20783381047509,0.468565659970853,0.300946099727719,4.5481500811197,2.0694614258501,0,0.737476674166813,1.04260337361699,0.979005787313703,0.686286847621712,0,0,0,3.03127571446259,14.9791895559447,4.83824469327489,2.48107807818777,0.460385919864187,2.24528075546459,2.05022638809122,1.02341449813341,2.41280881715411,1.48418066444991,0.462629081407967,1.06537035187876,0.0821271560138091,2.07701771673448,0.464841513839837,0,3.00759705454927,4.32780647998713,0.459257792658427,0,1.31124414959424,0.451199612907412,1.38627606787947,1.56869953835371,1.46139224653261,1.47772280450026,0,1.19065593693561,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,2.05160100093111,1.96808787419823,1.95227036798582,0.412164046590889,0,0,4.01985876597321,0.650060246036521,3.21367859688319,0.870036464629098,0,0.460511024178389,0.275673144969061,0,0.290033387828457,0,3.73934549716297,1.4875642382488,0.384380134730212,2.04180339991335,1.6185244936888,0.929691098594572,1.5740617341532,0.6970372701606,0.924100740528266,1.59691809095107,1.73986598415015,0.18532421910392,1.00187420719394,0.744316738719335,0.949138274156178,1.14378116354295,2.55897791311334,0,1.27281299170375,0,0.359744915166629,0.54907405947211,0.471249609382746,1.01091240786658,1.58510321173008,0,0.975267478179181,1.21856744815642,0,0.409499734223957,0.707027159768564,0,1.10273068709225,0.66343897524122,1.315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| ||
|short_description=p3@CDKN1A | |||
}} | }} |
Latest revision as of 12:43, 18 September 2015
Short description: | p3@CDKN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDKN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001220777_5end |
EntrezGene: | CDKN1A |
HGNC: | 1784 |
UniProt: | P38936Q6FI05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.78e-12 | 253 |
embryonic cell | 5.54e-12 | 250 |
squamous epithelial cell | 1.23e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 5.36e-08 | 83 |
simple squamous epithelium | 4.16e-07 | 22 |
extraembryonic structure | 5.23e-07 | 24 |
ectodermal placode | 9.58e-07 | 31 |