FFCP PHASE1:Hg19::chr6:35311353..35311364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:35311353..35311364,- | |||
|coexpression_cluster_id=C692 | |||
|description=CAGE_peak_at_chr6:35311353..35311364,- | |||
|id=chr6:35311353..35311364,- | |||
|ontology_enrichment_celltype=CL:0002057!2.00e-46!42;CL:0000860!6.57e-43!45;CL:0000766!1.99e-40!76;CL:0000839!2.32e-35!70;CL:0000557!9.09e-35!71;CL:0002194!7.86e-31!63;CL:0000576!7.86e-31!63;CL:0000040!7.86e-31!63;CL:0000559!7.86e-31!63;CL:0000738!3.11e-30!140;CL:0002009!1.06e-29!65;CL:0000763!6.90e-27!112;CL:0000049!6.90e-27!112;CL:0002031!4.08e-25!124;CL:0000037!1.97e-24!172;CL:0000566!1.97e-24!172;CL:0002087!2.14e-24!119;CL:0002032!1.17e-22!165;CL:0000837!1.17e-22!165;CL:0000988!1.38e-22!182;CL:0000134!4.50e-09!358;CL:0002320!1.02e-08!365;CL:0002274!5.36e-08!5;CL:0000457!5.36e-08!5;CL:0002191!5.36e-08!5;CL:0000097!5.36e-08!5;CL:0000831!5.36e-08!5;CL:0002028!5.36e-08!5;CL:0000219!1.79e-07!390;CL:0002393!6.59e-07!9;CL:0002397!6.59e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.09e-28;5!CL:0000163;4.20e-16;9!CL:0000860;7.02e-16;33!CL:0002057;7.02e-16;33!CL:0000766;2.45e-13;69!CL:0000473;5.53e-11;39!CL:0000234;5.53e-11;39!CL:0000763;2.51e-10;100!CL:0000771;3.57e-09;2!CL:0000576;1.11e-08;48!CL:0000094;1.13e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.50e-29,72;CL:0000097,1.44e-28,5;CL:0002028,1.44e-28,5;CL:0000839,7.46e-22,66;CL:0000557,1.61e-21,67;CL:0000763,3.73e-19,108;CL:0000049,3.73e-19,108;CL:0000738,9.17e-18,136;CL:0000860,3.09e-17,42;CL:0002057,3.09e-17,42;CL:0000163,3.42e-16,9;CL:0000473,4.93e-15,48;CL:0000234,4.93e-15,48;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0002031,3.12e-14,120;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0002194,6.07e-12,59;CL:0000576,6.07e-12,59;CL:0000040,6.07e-12,59;CL:0000559,6.07e-12,59;CL:0002009,1.52e-11,61;CL:0000771,3.43e-09,2;CL:0000094,1.01e-08,8;CL:0002087,1.06e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.08e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.23e-30!80;UBERON:0001474!1.58e-27!86;UBERON:0002390!5.12e-26!102;UBERON:0003061!5.12e-26!102;UBERON:0002193!6.23e-25!112;UBERON:0004765!2.00e-22!101;UBERON:0001434!2.00e-22!101;UBERON:0002405!1.51e-20!115;UBERON:0003081!5.02e-11!216;UBERON:0002204!6.69e-11!167;UBERON:0002384!3.09e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.59e-19,76;UBERON:0001474,1.77e-17,82;UBERON:0004765,7.27e-16,90;UBERON:0002405,2.49e-15,93;UBERON:0002390,1.64e-14,98;UBERON:0003061,1.64e-14,98;UBERON:0001434,3.32e-14,100;UBERON:0002193,4.28e-13,108;UBERON:0002204,3.80e-08,167 | |||
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| ||
|short_description=p@chr6:35311353..35311364,- | |||
}} | }} |
Latest revision as of 01:00, 31 July 2015
Short description: | p@chr6:35311353..35311364, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35311353..35311364, - |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.50e-29 | 72 |
mast cell | 1.44e-28 | 5 |
basophil mast progenitor cell | 1.44e-28 | 5 |
myeloid lineage restricted progenitor cell | 7.46e-22 | 66 |
granulocyte monocyte progenitor cell | 1.61e-21 | 67 |
myeloid cell | 3.73e-19 | 108 |
common myeloid progenitor | 3.73e-19 | 108 |
leukocyte | 9.17e-18 | 136 |
classical monocyte | 3.09e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.09e-17 | 42 |
endocrine cell | 3.42e-16 | 9 |
defensive cell | 4.93e-15 | 48 |
phagocyte | 4.93e-15 | 48 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 3.12e-14 | 120 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
monopoietic cell | 6.07e-12 | 59 |
monocyte | 6.07e-12 | 59 |
monoblast | 6.07e-12 | 59 |
promonocyte | 6.07e-12 | 59 |
macrophage dendritic cell progenitor | 1.52e-11 | 61 |
eosinophil | 3.43e-09 | 2 |
granulocyte | 1.01e-08 | 8 |
nongranular leukocyte | 1.06e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.59e-19 | 76 |
bone element | 1.77e-17 | 82 |
skeletal element | 7.27e-16 | 90 |
immune system | 2.49e-15 | 93 |
hematopoietic system | 1.64e-14 | 98 |
blood island | 1.64e-14 | 98 |
skeletal system | 3.32e-14 | 100 |
hemolymphoid system | 4.28e-13 | 108 |
musculoskeletal system | 3.80e-08 | 167 |