FFCP PHASE1:Hg19::chr6:31620000..31620025,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:31620000..31620025,+ to FFCP PHASE1:Hg19::chr6:31620000..31620025,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55937 | |EntrezGene=55937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13916 | |HGNC=13916 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SRP5 | |UniProt=Q5SRP5 | ||
|association_with_transcript=-167bp_to_ENST00000375918_5end | |||
|cluster_id=chr6:31620000..31620025,+ | |||
|coexpression_cluster_id=C1366 | |||
|description=CAGE_peak_6_at_APOM_5end | |||
|id=chr6:31620000..31620025,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.61e-22!42;CL:0000860!7.63e-21!45;CL:0000738!1.33e-18!140;CL:0000037!5.23e-18!172;CL:0000566!5.23e-18!172;CL:0000988!1.03e-16!182;CL:0002032!2.18e-15!165;CL:0000837!2.18e-15!165;CL:0002031!1.03e-14!124;CL:0000766!1.20e-14!76;CL:0002087!1.06e-13!119;CL:0000557!1.36e-13!71;CL:0000763!4.30e-13!112;CL:0000049!4.30e-13!112;CL:0000839!1.26e-12!70;CL:0002009!3.16e-12!65;CL:0002194!2.79e-11!63;CL:0000576!2.79e-11!63;CL:0000040!2.79e-11!63;CL:0000559!2.79e-11!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-25;33!CL:0002057;1.80e-25;33!CL:0000576;9.79e-20;48!CL:0000473;9.45e-18;39!CL:0000234;9.45e-18;39!CL:0000766;2.11e-16;69!CL:0002393;5.44e-12;6!CL:0002397;5.44e-12;6!CL:0002087;5.08e-09;104!CL:0000763;2.73e-08;100!CL:0000738;1.05e-07;136!CL:0000097;6.69e-07;5!CL:0000623;8.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.75e-38,42;CL:0002057,7.75e-38,42;CL:0000766,4.28e-34,72;CL:0000738,1.09e-32,136;CL:0000473,9.47e-32,48;CL:0000234,9.47e-32,48;CL:0000557,1.42e-31,67;CL:0000037,6.40e-29,168;CL:0000839,1.76e-28,66;CL:0000988,1.26e-27,177;CL:0002009,2.41e-27,61;CL:0000763,4.50e-26,108;CL:0000049,4.50e-26,108;CL:0002031,5.57e-26,120;CL:0002194,6.15e-25,59;CL:0000576,6.15e-25,59;CL:0000040,6.15e-25,59;CL:0000559,6.15e-25,59;CL:0002032,8.49e-25,161;CL:0000837,8.49e-25,161;CL:0002087,3.16e-22,115;CL:0000134,1.23e-10,354;CL:0002393,3.87e-10,9;CL:0002397,3.87e-10,9;CL:0002320,4.70e-10,361;CL:0000219,1.70e-08,386;CL:0000097,6.59e-07,5;CL:0002028,6.59e-07,5;CL:0000623,8.13e-07,3;CL:0000825,8.13e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-24;42!CL:0000049;8.81e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.16e-11!80;UBERON:0002390!1.19e-10!102;UBERON:0003061!1.19e-10!102;UBERON:0001474!1.34e-10!86;UBERON:0002405!1.43e-10!115;UBERON:0002193!1.82e-09!112;UBERON:0004765!1.48e-07!101;UBERON:0001434!1.48e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.55e-28,76;UBERON:0001474,3.33e-25,82;UBERON:0002390,1.99e-24,98;UBERON:0003061,1.99e-24,98;UBERON:0002405,4.95e-22,93;UBERON:0004765,7.17e-22,90;UBERON:0002193,6.28e-21,108;UBERON:0001434,1.77e-18,100;UBERON:0003081,8.12e-10,203;UBERON:0002384,2.86e-09,371;UBERON:0002204,6.96e-08,167 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0.672325146451775,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0.125542639594803,0,0.328402357799783,0.236132343941038,0.393364276848904,1.53531759238885,2.32224184974114,0.919421224478927,0,0.369754010166788,0.697204805222715,0,4.9912074686924,8.30993112797816,12.2332112956786,7.81239134577067,0,0,0,0.872389432677388,0.755751887377619,2.42584061187816,0.697287110717054,1.23350366406548,3.40677007984614,0.28769239232215,1.7931249457037,4.7296445977717,3.7922024881028,7.10033151942209,13.5426486594342,0.752969358170419,1.91034305040492,2.69668181334102,3.36692281607993,4.49300637906531,9.59005688698562,1.31940520074686,0.199463657621632,1.27867425159808,1.7412554317715,3.97169657283798,8.71951148593805,1.50749199154046,3.65038042894141,6.29847649644838,1.81619850790011,6.2607198117886,9.17740923578565,3.16882929467913,4.889898899196,2.51590374610051,0.561643155732475,0.300353785683013,1.12507910687956,0.285012743741249,2.38700012638908,0.730656615058536,0,0,0,0.853460445133014,0,0.574752439954483,0.661044872784862,0,1.1384259382189,2.34894875748376,1.14681968437569,0,8.96813700770458,0.790152254325231,1.180258620683,0.786021525498329,1.02800749499755,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0.883817722424512,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0.552700035571697,0,0.741432815810302,0.802622484269139,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.80642697289893,1.06976078313403,1.15859523106239,2.43806866313962,0,0,0,0,0,0,3.40644409211845,0,0.221729397462564,0.263504357079378,0.392937226493138,0,0,0,0.174129737299267,0.26591592103773,1.43094374583205,1.14398982156026,0.74291500265913,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0,0,2.28081631715554,0.488124115096339,1.10298924103761,0,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,0,0,25.038279312852,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0,0,0,0.206105058476878,1.03056216018252,0.18611685633159,0,0.0974370051611986,0,0,0.323292113637624,0.355009592516614,0,0,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,2.20731549707325,0,0,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.866198686566443,0.462985512576611,0.380508304469197,0,1.71697232418975,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,11.3312544716067,0.088048434013226,5.59785911960085,3.45887888200707,7.82703087243556,0.063497894292169,0,0,0,0.308482478109971,0,0,0.448524337381443,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.672510863961164,4.13764596424047,3.66566877261179,8.34229735818364,0.254094624222463,0,0.773288812777695,0,0.637938751653163,1.49801404789436,0,3.31532410748828,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0.413536052245775,4.09856981555372,4.37582986994122,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.241718899183244,0,0.0920809889358963,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0,0.460511024178389,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0.2023155617111,0,0.31481234683064,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0,0,1.58510321173008,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0.354761064070598,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0.427296284509893,0,0.245040215981032,0.371606350251437,0.721346064882224,0.355709216742071,0.159426272728822,0.798317485731266,0,2.54008299268659,0,0,0.228234679033192,0.156679895773023,0,3.04725200042886,0.1605880751037,0,0.851692475380653,0.687010689511529,0.307240764308458,0.447352215784832,0,0.19538809540204,0.835218521685727,0,0,0.99921590399346,2.81974010175699,0,0,0.36408156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| ||
|short_description=p6@APOM | |||
}} | }} |
Latest revision as of 22:48, 17 September 2015
Short description: | p6@APOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APOM_5end |
Coexpression cluster: | C1366_Eosinophils_CD14_immature_Natural_CD34_CD8_Mast |
Association with transcript: | -167bp_to_ENST00000375918_5end |
EntrezGene: | APOM |
HGNC: | 13916 |
UniProt: | Q5SRP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.55e-28 | 76 |
bone element | 3.33e-25 | 82 |
hematopoietic system | 1.99e-24 | 98 |
blood island | 1.99e-24 | 98 |
immune system | 4.95e-22 | 93 |
skeletal element | 7.17e-22 | 90 |
hemolymphoid system | 6.28e-21 | 108 |
skeletal system | 1.77e-18 | 100 |
lateral plate mesoderm | 8.12e-10 | 203 |
connective tissue | 2.86e-09 | 371 |
musculoskeletal system | 6.96e-08 | 167 |