FFCP PHASE1:Hg19::chr6:30710392..30710433,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:30710392..30710433,- to FFCP PHASE1:Hg19::chr6:30710392..30710433,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10211 | |EntrezGene=10211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3757 | |HGNC=3757 | ||
|TSSclassifier=strong | |||
|UniProt=O75955,Q5ST80 | |UniProt=O75955,Q5ST80 | ||
|association_with_transcript=19bp_to_NM_005803,uc003nrm.2,uc011dmr.1_5end | |||
|cluster_id=chr6:30710392..30710433,- | |||
|description=CAGE_peak_2_at_FLOT1_5end | |||
|id=chr6:30710392..30710433,- | |||
|ontology_enrichment_celltype=CL:0000055!7.82e-17!180;CL:0000183!1.76e-08!59;CL:0000057!6.69e-08!75;CL:0000860!3.83e-07!45;CL:0000187!6.00e-07!54;CL:0000680!6.81e-07!57;CL:0000056!6.81e-07!57;CL:0000355!6.81e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.22e-10;33!CL:0002057;5.22e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-07,76;CL:0000187,2.43e-07,55;CL:0000680,2.81e-07,58;CL:0000056,2.81e-07,58;CL:0000355,2.81e-07,58;CL:0000393,8.79e-07,61;CL:0000211,8.79e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!6.61e-11!511;UBERON:0000468!7.76e-11!659;UBERON:0000481!1.71e-10!347;UBERON:0000467!2.01e-10!625;UBERON:0000480!3.59e-10!626;UBERON:0002050!1.39e-09!605;UBERON:0005423!1.39e-09!605;UBERON:0000923!1.99e-09!604;UBERON:0005291!1.99e-09!604;UBERON:0006598!1.99e-09!604;UBERON:0002532!1.99e-09!604;UBERON:0000922!1.50e-08!612;UBERON:0000926!1.75e-07!448;UBERON:0004120!1.75e-07!448;UBERON:0006603!1.75e-07!448;UBERON:0005256!3.74e-07!143;UBERON:0003104!8.25e-07!238;UBERON:0009142!8.25e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.80e-08,160;UBERON:0009142,2.80e-08,160;UBERON:0007503,1.15e-07,78;UBERON:0000923,1.63e-07,560;UBERON:0010316,1.63e-07,560;UBERON:0005291,1.63e-07,560;UBERON:0006598,1.63e-07,560;UBERON:0010317,1.63e-07,560;UBERON:0002532,1.63e-07,560;UBERON:0002204,2.30e-07,167;UBERON:0005256,2.93e-07,122;UBERON:0002050,5.21e-07,564;UBERON:0000922,6.20e-07,592;UBERON:0005423,8.67e-07,581 | |||
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| ||
|short_description=p2@FLOT1 | |||
}} | }} |
Latest revision as of 18:25, 17 September 2015
Short description: | p2@FLOT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FLOT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_NM_005803, uc003nrm.2, uc011dmr.1_5end |
EntrezGene: | FLOT1 |
HGNC: | 3757 |
UniProt: | O75955Q5ST80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-07 | 76 |
muscle cell | 2.43e-07 | 55 |
muscle precursor cell | 2.81e-07 | 58 |
myoblast | 2.81e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.81e-07 | 58 |
electrically responsive cell | 8.79e-07 | 61 |
electrically active cell | 8.79e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.80e-08 | 160 |
entire embryonic mesenchyme | 2.80e-08 | 160 |
epithelial vesicle | 1.15e-07 | 78 |
germ layer | 1.63e-07 | 560 |
germ layer / neural crest | 1.63e-07 | 560 |
embryonic tissue | 1.63e-07 | 560 |
presumptive structure | 1.63e-07 | 560 |
germ layer / neural crest derived structure | 1.63e-07 | 560 |
epiblast (generic) | 1.63e-07 | 560 |
musculoskeletal system | 2.30e-07 | 167 |
trunk mesenchyme | 2.93e-07 | 122 |
embryonic structure | 5.21e-07 | 564 |
embryo | 6.20e-07 | 592 |
developing anatomical structure | 8.67e-07 | 581 |