FFCP PHASE1:Hg19::chr6:2971494..2971544,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:2971494..2971544,- to FFCP PHASE1:Hg19::chr6:2971494..2971544,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5269 | |EntrezGene=5269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8950 | |HGNC=8950 | ||
|TSSclassifier=strong | |||
|UniProt=P35237 | |UniProt=P35237 | ||
|association_with_transcript=0bp_to_ENST00000380539_5end | |||
|cluster_id=chr6:2971494..2971544,- | |||
|description=CAGE_peak_1_at_SERPINB6_5end | |||
|id=chr6:2971494..2971544,- | |||
|ontology_enrichment_celltype=CL:0000115!1.91e-09!35;CL:0000222!1.75e-08!119;CL:0000557!2.25e-08!71;CL:0002078!3.04e-08!44;CL:0000839!8.99e-08!70;CL:0002194!1.46e-07!63;CL:0000576!1.46e-07!63;CL:0000040!1.46e-07!63;CL:0000559!1.46e-07!63;CL:0000766!6.80e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.41e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.33e-10,36;CL:0000222,6.41e-09,121;CL:0002078,1.12e-08,45;CL:0000557,3.98e-08,67;CL:0000473,1.25e-07,48;CL:0000234,1.25e-07,48;CL:0000839,1.60e-07,66;CL:0002194,2.54e-07,59;CL:0000576,2.54e-07,59;CL:0000040,2.54e-07,59;CL:0000559,2.54e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.09e-20!216;UBERON:0000926!5.89e-17!448;UBERON:0004120!5.89e-17!448;UBERON:0006603!5.89e-17!448;UBERON:0001009!1.71e-12!113;UBERON:0004535!1.98e-11!110;UBERON:0003914!5.05e-11!118;UBERON:0000055!3.45e-10!69;UBERON:0001981!4.51e-10!60;UBERON:0007500!4.51e-10!60;UBERON:0004537!4.51e-10!60;UBERON:0006965!4.51e-10!60;UBERON:0002204!9.97e-10!167;UBERON:0002049!2.23e-09!79;UBERON:0007798!2.23e-09!79;UBERON:0002193!7.96e-09!112;UBERON:0002371!1.51e-08!80;UBERON:0004872!1.56e-08!84;UBERON:0002390!8.28e-08!102;UBERON:0003061!8.28e-08!102;UBERON:0001474!2.91e-07!86;UBERON:0000467!3.12e-07!625;UBERON:0000480!5.71e-07!626;UBERON:0004765!8.57e-07!101;UBERON:0001434!8.57e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.41e-18,203;UBERON:0000926,1.16e-14,315;UBERON:0004120,1.16e-14,315;UBERON:0006603,1.16e-14,315;UBERON:0001009,3.18e-12,112;UBERON:0004535,3.61e-11,109;UBERON:0003914,6.59e-11,117;UBERON:0000055,6.46e-10,68;UBERON:0002204,7.20e-10,167;UBERON:0007500,8.66e-10,59;UBERON:0001981,8.66e-10,59;UBERON:0004537,8.66e-10,59;UBERON:0006965,8.66e-10,59;UBERON:0002049,4.07e-09,78;UBERON:0007798,4.07e-09,78;UBERON:0002193,1.49e-08,108;UBERON:0002371,2.72e-08,76;UBERON:0004872,2.74e-08,83;UBERON:0002390,1.52e-07,98;UBERON:0003061,1.52e-07,98;UBERON:0002405,3.61e-07,93;UBERON:0004765,3.92e-07,90;UBERON:0001474,5.31e-07,82;UBERON:0001434,7.89e-07,100 | |||
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| ||
|short_description=p1@SERPINB6 | |||
}} | }} |
Latest revision as of 14:32, 17 September 2015
Short description: | p1@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERPINB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380539_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.33e-10 | 36 |
mesodermal cell | 6.41e-09 | 121 |
meso-epithelial cell | 1.12e-08 | 45 |
granulocyte monocyte progenitor cell | 3.98e-08 | 67 |
defensive cell | 1.25e-07 | 48 |
phagocyte | 1.25e-07 | 48 |
myeloid lineage restricted progenitor cell | 1.60e-07 | 66 |
monopoietic cell | 2.54e-07 | 59 |
monocyte | 2.54e-07 | 59 |
monoblast | 2.54e-07 | 59 |
promonocyte | 2.54e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.41e-18 | 203 |
mesoderm | 1.16e-14 | 315 |
mesoderm-derived structure | 1.16e-14 | 315 |
presumptive mesoderm | 1.16e-14 | 315 |
circulatory system | 3.18e-12 | 112 |
cardiovascular system | 3.61e-11 | 109 |
epithelial tube | 6.59e-11 | 117 |
vessel | 6.46e-10 | 68 |
musculoskeletal system | 7.20e-10 | 167 |
epithelial tube open at both ends | 8.66e-10 | 59 |
blood vessel | 8.66e-10 | 59 |
blood vasculature | 8.66e-10 | 59 |
vascular cord | 8.66e-10 | 59 |
vasculature | 4.07e-09 | 78 |
vascular system | 4.07e-09 | 78 |
hemolymphoid system | 1.49e-08 | 108 |
bone marrow | 2.72e-08 | 76 |
splanchnic layer of lateral plate mesoderm | 2.74e-08 | 83 |
hematopoietic system | 1.52e-07 | 98 |
blood island | 1.52e-07 | 98 |
immune system | 3.61e-07 | 93 |
skeletal element | 3.92e-07 | 90 |
bone element | 5.31e-07 | 82 |
skeletal system | 7.89e-07 | 100 |