FFCP PHASE1:Hg19::chr6:144416737..144416766,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:144416737..144416766,- to FFCP PHASE1:Hg19::chr6:144416737..144416766,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83443 | |EntrezGene=83443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21083 | |HGNC=21083 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWJ5 | |UniProt=Q9BWJ5 | ||
|association_with_transcript=0bp_to_ENST00000367569,NM_031287,uc003qkr.1_5end | |||
|cluster_id=chr6:144416737..144416766,- | |||
|coexpression_cluster_id=C1437 | |||
|description=CAGE_peak_2_at_SF3B5_5end | |||
|id=chr6:144416737..144416766,- | |||
|ontology_enrichment_celltype=CL:0002371!1.04e-19!591;CL:0000183!1.08e-17!59;CL:0000048!3.81e-16!430;CL:0000222!1.31e-15!119;CL:0000144!1.49e-15!625;CL:0000187!3.31e-15!54;CL:0000723!5.59e-15!436;CL:0000680!1.62e-14!57;CL:0000056!1.62e-14!57;CL:0000355!1.62e-14!57;CL:0000055!1.06e-13!180;CL:0000034!1.36e-13!444;CL:0000393!2.08e-13!60;CL:0000211!2.08e-13!60;CL:0000192!6.64e-13!42;CL:0000514!6.64e-13!42;CL:0000359!4.18e-11!32;CL:0000012!3.77e-09!682;CL:0000548!9.39e-09!679;CL:0000004!9.39e-09!679;CL:0000255!9.39e-09!679;CL:0002320!4.98e-08!365;CL:0002057!6.46e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.57e-10;32!CL:0000192;4.64e-10;43!CL:0000187;5.29e-09;55!CL:0000393;7.61e-08;61!CL:0000211;7.61e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.40e-17,427;CL:0000222,2.03e-16,121;CL:0000723,5.54e-16,433;CL:0000187,1.04e-15,55;CL:0000680,5.26e-15,58;CL:0000056,5.26e-15,58;CL:0000355,5.26e-15,58;CL:0000034,1.53e-14,441;CL:0000393,7.02e-14,61;CL:0000211,7.02e-14,61;CL:0000192,2.09e-13,43;CL:0000514,2.09e-13,43;CL:0000359,4.18e-11,32;CL:0002320,1.64e-08,361;CL:0000134,5.80e-07,354;CL:0000860,6.46e-07,42;CL:0002057,6.46e-07,42;CL:0000473,8.75e-07,48;CL:0000234,8.75e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000514;4.64e-10;43!CL:0000355;1.08e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.08e-17!70;UBERON:0000914!9.14e-17!83;UBERON:0002329!9.14e-17!83;UBERON:0003077!9.14e-17!83;UBERON:0003059!9.14e-17!83;UBERON:0007282!9.14e-17!83;UBERON:0009618!9.14e-17!83;UBERON:0007285!9.14e-17!83;UBERON:0002204!2.66e-15!167;UBERON:0003081!9.14e-15!216;UBERON:0001134!6.60e-14!61;UBERON:0002036!6.60e-14!61;UBERON:0003082!6.60e-14!61;UBERON:0000486!2.87e-13!82;UBERON:0002385!6.19e-13!63;UBERON:0001015!6.19e-13!63;UBERON:0000383!6.19e-13!63;UBERON:0002049!8.66e-13!79;UBERON:0007798!8.66e-13!79;UBERON:0001637!4.40e-12!42;UBERON:0003509!4.40e-12!42;UBERON:0004572!4.40e-12!42;UBERON:0005256!7.16e-12!143;UBERON:0004872!1.22e-11!84;UBERON:0001981!2.50e-11!60;UBERON:0007500!2.50e-11!60;UBERON:0004537!2.50e-11!60;UBERON:0006965!2.50e-11!60;UBERON:0000055!2.79e-11!69;UBERON:0004535!2.44e-10!110;UBERON:0001009!3.71e-10!113;UBERON:0003914!1.82e-09!118;UBERON:0000926!1.85e-09!448;UBERON:0004120!1.85e-09!448;UBERON:0006603!1.85e-09!448;UBERON:0000490!7.59e-09!138;UBERON:0004573!1.53e-08!33;UBERON:0004571!1.53e-08!33;UBERON:0002100!3.05e-07!216;UBERON:0002384!9.07e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.22e-08;42!UBERON:0003509;1.22e-08;42!UBERON:0004572;1.22e-08;42!UBERON:0004573;1.02e-07;33!UBERON:0004571;1.02e-07;33!UBERON:0007500;1.42e-07;56!UBERON:0001981;1.42e-07;56!UBERON:0004537;1.42e-07;56!UBERON:0003914;6.93e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.47e-21,78;UBERON:0000926,3.21e-19,315;UBERON:0004120,3.21e-19,315;UBERON:0006603,3.21e-19,315;UBERON:0002204,2.23e-18,167;UBERON:0002329,6.62e-18,71;UBERON:0003059,6.62e-18,71;UBERON:0007282,6.62e-18,71;UBERON:0004290,6.62e-18,71;UBERON:0009618,6.62e-18,71;UBERON:0007524,7.40e-18,73;UBERON:0003077,2.35e-17,72;UBERON:0007285,2.35e-17,72;UBERON:0003081,4.04e-15,203;UBERON:0001134,2.21e-14,62;UBERON:0002036,2.21e-14,62;UBERON:0003082,2.21e-14,62;UBERON:0000486,1.05e-13,83;UBERON:0002385,2.14e-13,64;UBERON:0001015,2.14e-13,64;UBERON:0000383,2.14e-13,64;UBERON:0002049,6.72e-13,78;UBERON:0007798,6.72e-13,78;UBERON:0001637,4.40e-12,42;UBERON:0003509,4.40e-12,42;UBERON:0004572,4.40e-12,42;UBERON:0003104,5.52e-12,160;UBERON:0009142,5.52e-12,160;UBERON:0004872,9.94e-12,83;UBERON:0000490,1.10e-11,148;UBERON:0007500,1.85e-11,59;UBERON:0001981,1.85e-11,59;UBERON:0004537,1.85e-11,59;UBERON:0006965,1.85e-11,59;UBERON:0000055,2.16e-11,68;UBERON:0005256,3.92e-11,122;UBERON:0004535,2.15e-10,109;UBERON:0001009,3.29e-10,112;UBERON:0003914,3.94e-09,117;UBERON:0004573,1.53e-08,33;UBERON:0004571,1.53e-08,33;UBERON:0002384,3.36e-07,371 | |||
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| ||
|short_description=p2@SF3B5 | |||
}} | }} |
Latest revision as of 21:05, 15 September 2015
Short description: | p2@SF3B5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SF3B5_5end |
Coexpression cluster: | C1437_Mesenchymal_Osteoblast_Renal_Pericytes_Placental_Fibroblast_Nucleus |
Association with transcript: | 0bp_to_ENST00000367569, NM_031287, uc003qkr.1_5end |
EntrezGene: | SF3B5 |
HGNC: | 21083 |
UniProt: | Q9BWJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.40e-17 | 427 |
mesodermal cell | 2.03e-16 | 121 |
somatic stem cell | 5.54e-16 | 433 |
muscle cell | 1.04e-15 | 55 |
muscle precursor cell | 5.26e-15 | 58 |
myoblast | 5.26e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.26e-15 | 58 |
stem cell | 1.53e-14 | 441 |
electrically responsive cell | 7.02e-14 | 61 |
electrically active cell | 7.02e-14 | 61 |
smooth muscle cell | 2.09e-13 | 43 |
smooth muscle myoblast | 2.09e-13 | 43 |
vascular associated smooth muscle cell | 4.18e-11 | 32 |
connective tissue cell | 1.64e-08 | 361 |
mesenchymal cell | 5.80e-07 | 354 |
classical monocyte | 6.46e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.46e-07 | 42 |
defensive cell | 8.75e-07 | 48 |
phagocyte | 8.75e-07 | 48 |