FFCP PHASE1:Hg19::chr6:139349636..139349663,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:139349636..139349663,+ to FFCP PHASE1:Hg19::chr6:139349636..139349663,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58527 | |EntrezGene=58527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21230 | |HGNC=21230 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P1F3 | |UniProt=Q9P1F3 | ||
|association_with_transcript=-155bp_to_ENST00000367660,NM_021243,uc003qil.2,uc003qim.2_5end | |||
|cluster_id=chr6:139349636..139349663,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_3_at_C6orf115_5end | |||
|id=chr6:139349636..139349663,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.82e-20!248;CL:0000220!1.27e-19!246;CL:0000222!4.92e-13!119;CL:0000055!1.31e-12!180;CL:0000066!1.16e-09!254;CL:0000710!7.56e-09!20;CL:0000213!7.60e-08!57;CL:0000215!7.60e-08!57;CL:0000147!7.94e-08!14;CL:0000148!9.38e-08!10;CL:0000541!9.38e-08!10;CL:0002077!1.03e-07!33;CL:0000075!2.59e-07!27;CL:0000221!7.57e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.21e-16;10!CL:0000147;3.61e-14;14!CL:0000710;2.24e-11;20!CL:0002567;3.60e-09;3!CL:0000075;7.81e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.50e-16,10;CL:0000541,1.50e-16,10;CL:0002321,1.79e-15,250;CL:0000147,4.78e-14,14;CL:0000710,3.52e-11,20;CL:0000133,4.73e-10,59;CL:0002567,3.71e-09,3;CL:0000221,1.66e-08,72;CL:0000075,1.07e-07,27;CL:0000047,1.46e-07,8;CL:0000222,1.63e-07,121;CL:0002077,5.43e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.52e-08!79;UBERON:0007798!2.52e-08!79;UBERON:0000055!1.01e-07!69;UBERON:0001637!1.17e-07!42;UBERON:0003509!1.17e-07!42;UBERON:0004572!1.17e-07!42;UBERON:0000468!1.79e-07!659;UBERON:0001981!5.24e-07!60;UBERON:0007500!5.24e-07!60;UBERON:0004537!5.24e-07!60;UBERON:0006965!5.24e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.72e-07;33!UBERON:0004571;5.72e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.46e-08,42;UBERON:0003509,2.46e-08,42;UBERON:0004572,2.46e-08,42;UBERON:0007500,7.86e-08,59;UBERON:0001981,7.86e-08,59;UBERON:0004537,7.86e-08,59;UBERON:0006965,7.86e-08,59;UBERON:0000055,4.16e-07,68;UBERON:0004573,5.13e-07,33;UBERON:0004571,5.13e-07,33;UBERON:0004872,9.13e-07,83 | |||
|phase1_expression=1.2717486548939,1.07050261945492,0.845726424575827,2.00146596706261,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0.263766978228454,0.123766352960047,0,0,1.80808358407193,1.46062018077475,0.975865597581014,0,0,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0.895661896959697,1.29557466407592,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,2.1686349143074,0.50133791063589,1.59331170856906,0,0,0.567208902984407,0.221729397462564,0.702678285545008,0.130979075497713,0.728590576585084,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,3.39184765154406,0.838998872419812,0.550236083880135,0.835979866147242,1.03366703667732,0.71153252537342,0.33472061276467,1.20848795132744,0,0.24406205754817,2.20597848207521,1.62028389576352,0.446498641420399,0.22452937262617,0.112611480483322,1.53316637465883,0,0.916008719652036,0,0,0.436094052142534,0,1.39293562831038,0.926864265692532,0,0.709336764396714,0,0,0.49333509683432,0,0.808264032418128,0.490385709340376,0.151357427644931,0,0.234321431833797,0.936480230490962,0.570471821544449,1.34503812496621,0.822041490506354,0.647491777472526,0.561803226808994,0.408308342509787,0.61417158655884,0.516628905878827,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0.875829639103749,0,0,0.612975591598039,0.45071417671979,0.907457465280168,0.717558542755448,0.213557388818567,0.847727604638247,0.300091096084402,0.206105058476878,0.257640540045629,0.930584281657949,0.675105328965065,0.974370051611986,0.504867548488229,0.552299391853796,0.484938170456436,0,0.503760491138201,0.339121184620975,1.54608682530637,0.818238361772504,1.14721838155602,1.34171076742555,1.19276791489337,1.2781333715647,0.932949495138334,0.504641701751257,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0.392442930250692,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0.171567810298526,0.109750285408626,0,0.402115889646523,0.555530670951178,0,0,0,0.811512834825538,0.939269553886573,0.433099343283221,0.462985512576611,0.951270761172991,0.790204397959275,0,1.23108503043699,0.936017060556951,0.297262324577456,2.81201501960331,0.839910640994298,0.992425680696705,0.447792613514241,0,0,0,0,0,0,0,9.33419046094885,4.58386110669933,5.86087236050235,6.84289784090821,20.668326033368,19.8226418176986,18.5787181209876,0.224262168690721,0.87192013766656,0.66004457238855,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0.977208552881205,0.710783897485092,0.791951872933429,1.80863626235752,2.61460037580088,1.49959486773086,0,0.502257091432126,0,0.239624855491583,0,0,1.59259437334337,0.821905290201534,0.895304816199478,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,0.502548796003046,0,0,0,0,0,0,0.271265023699736,1.24782516918484,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0,0.955719759148911,0.195801157462741,0,0,0,0,0,0,0.30239029332968,1.48864684691266,0.460385919864187,0.841980283299221,0.768834895534206,0,0.321707842287215,1.48418066444991,0,0.532685175939381,0.821271560138091,0,0.581051892299796,0.483437798366489,0.40101294060657,0.644566922551274,0.918515585316854,0.728364672026868,1.04899531967539,0.902399225814824,1.00119938235739,0,0,0.633309773357254,0,0.680374821106063,0.215915916102139,0,0,0,0.509752546090077,0,0.223874754722178,0,0,1.28225062558195,0.656029291399411,0.325378394664303,0.103041011647722,0.54941678891006,1.15513299888823,0,0,3.21367859688319,0.096670718292122,0.462145851343933,0.307007349452259,0.137836572484531,0.644521469209642,0.870100163485371,0.170453254832202,0.445160178233687,1.4875642382488,0.576570202095319,0.893288987462089,0.809262246844399,0.929691098594572,0.62962469366128,0,0,0.532306030317022,0.869932992075073,0.9266210955196,1.43124886741991,0.372158369359667,0.316379424718726,0.38126038784765,0.767693373934002,0,0.318203247925937,0,1.07923474549989,0.274537029736055,0.942499218765491,0.606547444719948,0,2.10629228119491,0,2.19342140668156,0,0.136499911407986,0.707027159768564,0,0,3.3171948762061,1.31535265576129,0,0,1.21746226177622,2.16876448669825,0.563391205064483,0.860468113224309,0.294747123039363,1.07001315444375,1.06428319221179,0.844430541190656,0,0.379473173765715,0.349934720244983,0.577332676353072,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0.343505344755765,0,0.447352215784832,0.834245708559542,0.19538809540204,0,0,0.270455678475983,0.333071967997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| ||
|short_description=p3@C6orf115 | |||
}} | }} |
Latest revision as of 05:41, 25 September 2015
Short description: | p3@C6orf115 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C6orf115_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -155bp_to_ENST00000367660, NM_021243, uc003qil.2, uc003qim.2_5end |
EntrezGene: | C6orf115 |
HGNC: | 21230 |
UniProt: | Q9P1F3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.50e-16 | 10 |
melanoblast | 1.50e-16 | 10 |
embryonic cell | 1.79e-15 | 250 |
pigment cell | 4.78e-14 | 14 |
neurecto-epithelial cell | 3.52e-11 | 20 |
neurectodermal cell | 4.73e-10 | 59 |
light melanocyte | 3.71e-09 | 3 |
ectodermal cell | 1.66e-08 | 72 |
columnar/cuboidal epithelial cell | 1.07e-07 | 27 |
neuronal stem cell | 1.46e-07 | 8 |
mesodermal cell | 1.63e-07 | 121 |
ecto-epithelial cell | 5.43e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
artery | 2.46e-08 | 42 |
arterial blood vessel | 2.46e-08 | 42 |
arterial system | 2.46e-08 | 42 |
epithelial tube open at both ends | 7.86e-08 | 59 |
blood vessel | 7.86e-08 | 59 |
blood vasculature | 7.86e-08 | 59 |
vascular cord | 7.86e-08 | 59 |
vessel | 4.16e-07 | 68 |
systemic artery | 5.13e-07 | 33 |
systemic arterial system | 5.13e-07 | 33 |
splanchnic layer of lateral plate mesoderm | 9.13e-07 | 83 |