FFCP PHASE1:Hg19::chr6:1389989..1390019,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:1389989..1390019,+ to FFCP PHASE1:Hg19::chr6:1389989..1390019,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2295 | |EntrezGene=2295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3810 | |HGNC=3810 | ||
|TSSclassifier=strong | |||
|UniProt=Q12947 | |UniProt=Q12947 | ||
|association_with_transcript=-49bp_to_ENST00000259806,NM_001452,uc003mtm.2,uc003mtn.2_5end | |||
|cluster_id=chr6:1389989..1390019,+ | |||
|description=CAGE_peak_2_at_FOXF2_5end | |||
|id=chr6:1389989..1390019,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.72e-15!75;CL:0000055!1.71e-14!180;CL:0000499!2.80e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000499;3.63e-09;28!CL:0002552;2.22e-08;5!CL:0000327;1.51e-07;15!CL:0000153;3.64e-07;9!CL:0000447;3.64e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.91e-12,76;CL:0000499,3.79e-09,28;CL:0002552,1.45e-08,5;CL:0000136,1.16e-07,15;CL:0000327,1.49e-07,15;CL:0000153,2.96e-07,9;CL:0000447,2.96e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.96e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.41e-10!365;UBERON:0003102!5.06e-08!95;UBERON:0001737!5.72e-08!9;UBERON:0000033!7.20e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.36e-13;9!UBERON:0001557;6.36e-13;9!UBERON:0004457;1.15e-11;9!UBERON:0000042;1.15e-11;9!UBERON:0003688;2.72e-08;6!UBERON:0002358;2.72e-08;6!UBERON:0003684;2.72e-08;6!UBERON:0001178;2.72e-08;6!UBERON:0000072;6.65e-08;37!UBERON:0000065;3.92e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.06e-13,9;UBERON:0001004,2.41e-09,74;UBERON:0001007,3.04e-09,145;UBERON:0001555,3.04e-09,145;UBERON:0007026,3.04e-09,145;UBERON:0008947,7.57e-09,38;UBERON:0003258,7.57e-09,38;UBERON:0003688,2.53e-08,6;UBERON:0002358,2.53e-08,6;UBERON:0003684,2.53e-08,6;UBERON:0001178,2.53e-08,6;UBERON:0004119,2.56e-08,160;UBERON:0000925,2.56e-08,160;UBERON:0006595,2.56e-08,160;UBERON:0004457,2.79e-08,12;UBERON:0000042,2.79e-08,12;UBERON:0003102,3.98e-07,99;UBERON:0000072,4.83e-07,47;UBERON:0000065,5.85e-07,54 | |||
|phase1_expression=4.90531624030503,1.49870366723688,3.10099689011137,8.00586386825043,1.78784437770915,0.872338524100369,2.53299878168311,1.89515962028049,1.56711376919903,0.737201809504527,1.39560233594486,0,0,2.35156070624089,2.98257638155124,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,4.51204119572301,3.62116297402059,0.795285947051099,1.45990461090791,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.264818361626438,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0,2.8757911252537,0.576175924479999,1.87457145467037,1.24864030732128,0,4.78235777765763,0.352303495931295,0,0,3.87892925384297,1.84251475967652,18.8052921739893,13.0680314301026,12.6106133932064,1.82032272387605,0.718618141816238,0.841680569770331,0.875829639103749,3.60183350129438,4.38977620880838,3.37136575378922,11.568330535808,0,0.538168907066586,1.2813443329114,0.847727604638247,1.50045548042201,1.23663035086127,1.03056216018252,0.744467425326359,0.675105328965065,0.974370051611986,0.757301322732344,1.47279837827679,3.07127507955743,0.355009592516614,0.503760491138201,2.37384829234683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73227200159376,5.22612539242115,4.57920956778616,3.74999507290139,4.35758888184812,4.50814176311084,2.69662616320329,2.94332197688019,1.92373578473195,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0,2.6064664424826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.63497894292169,0.763976851116555,1.17217447210047,0,0.719792448923265,0.300343057843917,0,1.45770409648969,3.48768055066624,1.10007428731425,0.129271715757778,7.15312891703765,0,0,0,0,0,0,1.85871391755592,0,0,0.65147236858747,1.77695974371273,0,0,0,0,0,0,0,0.718874566474748,3.44585807502342,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,3.80343624329334,0,0,3.95144636908534,2.85486382075459,2.68094105557689,1.7571212248907,0,0,1.03473071292505,0,0.184369168541703,4.86548241021264,2.74121620447837,2.40200396667599,0,0,0,0,0,0,2.97729369382532,1.38115775959256,1.96462066103151,2.81906128362542,2.55853624533352,1.12597744800525,8.90508398669946,0,0.532685175939381,0.410635780069046,1.03850885836724,0.929683027679674,0,0,0,2.06666006696292,0,3.40923478894503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.03041011647722,0.915694648183434,0.660075999364704,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.137836572484531,0.214840489736547,0.580066775656914,0.170453254832202,0,0,0,0,0.10115778085555,0.464845549297286,0.31481234683064,1.3940745403212,0.308033580176089,1.06461206063404,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,0,1.02359116524534,4.2793898803392,0.636406495851874,0,0.539617372749944,0.54907405947211,0.824686816419805,0.404364963146632,0,0,3.90106991271672,0.243713489631284,0,0.136499911407986,2.2624869112594,2.26016233240486,0.551365343546124,0,0,9.83918408253369,9.18252652865286,0.202910376962704,0,0.281695602532241,0,0,0,0,2.9555068941673,1.31717957183961,2.27683904259429,1.39973888097993,0,0,0,1.03558180854457,0.86101074534246,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0.715880777515084,0,0.933118762985422,0,0,0,1.67693789582787,0,2.22273980289274,1.93866549219044,0.278304294485554,0,0,0,0.724999575434793,0.455173793141999,0,0.709163045303809,0,0,0,0.885741385813839,0.723578631752448,0,0.442317039724898,0,0.438770794307945,1.85195387982283,4.74040730547251,0.0769502585037971,0,0.46112780877612,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,2.98578579323551,6.1035719507304,1.22206028986725,0.296521128680622,0.86494757262552,0.104421949505455,0.269604531922708,0,0.234264445725339,0,0.391329237864179,0,0,1.20990716048664,0.30607276163049,0.821425535170343,1.80388103297391,1.24425829676697,0,0.330991955875499,0.941798755221676,0,0,0.138674673013139,0.694238953340524,3.5277263069176,1.04471047896483,0,0,7.45023750925956,8.03982487948041,5.91231290783106,4.26751672549045,0.176512253383001,0.225980740780532,0.822251547880505,0.397429223405979,0.379864775735272,1.36885967914362,0,0,0,0.144090417154106,0,0,0,0.49701014226173,1.41416420770077,0,0,2.3459590056354,0.288950589901519,0.600420288709789,0.821432273351958,0,0,0.262887354279314,0,0,0.717873024576814,0.199679000498991,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.364497339948148,8.72130187758092,0,0,0,2.51002275065983,2.49489756515279,0,0,0,0,0,0,0,0,0.340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| ||
|short_description=p2@FOXF2 | |||
}} | }} |
Latest revision as of 05:24, 25 September 2015
Short description: | p2@FOXF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000259806, NM_001452, uc003mtm.2, uc003mtn.2_5end |
EntrezGene: | FOXF2 |
HGNC: | 3810 |
UniProt: | Q12947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.91e-12 | 76 |
stromal cell | 3.79e-09 | 28 |
fibroblast of gingiva | 1.45e-08 | 5 |
fat cell | 1.16e-07 | 15 |
extracellular matrix secreting cell | 1.49e-07 | 15 |
GAG secreting cell | 2.96e-07 | 9 |
carbohydrate secreting cell | 2.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.06e-13 | 9 |
respiratory system | 2.41e-09 | 74 |
digestive system | 3.04e-09 | 145 |
digestive tract | 3.04e-09 | 145 |
primitive gut | 3.04e-09 | 145 |
respiratory primordium | 7.57e-09 | 38 |
endoderm of foregut | 7.57e-09 | 38 |
omentum | 2.53e-08 | 6 |
peritoneum | 2.53e-08 | 6 |
abdominal cavity | 2.53e-08 | 6 |
visceral peritoneum | 2.53e-08 | 6 |
endoderm-derived structure | 2.56e-08 | 160 |
endoderm | 2.56e-08 | 160 |
presumptive endoderm | 2.56e-08 | 160 |
cavity lining | 2.79e-08 | 12 |
serous membrane | 2.79e-08 | 12 |
surface structure | 3.98e-07 | 99 |
segment of respiratory tract | 4.83e-07 | 47 |
respiratory tract | 5.85e-07 | 54 |