FFCP PHASE1:Hg19::chr6:121837348..121837351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:121837348..121837351,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr6:121837348..121837351,+ | |||
|id=chr6:121837348..121837351,+ | |||
|ontology_enrichment_celltype=CL:0000359!4.39e-21!32;CL:0000192!1.15e-15!42;CL:0000514!1.15e-15!42;CL:0002589!1.45e-15!2;CL:0000187!8.19e-12!54;CL:0002494!2.06e-11!16;CL:0000680!4.20e-11!57;CL:0000056!4.20e-11!57;CL:0000355!4.20e-11!57;CL:0002592!6.79e-11!3;CL:0000183!1.14e-10!59;CL:0000393!1.83e-10!60;CL:0000211!1.83e-10!60;CL:0000569!2.56e-08!4;CL:0000011!2.56e-08!4;CL:1000306!3.67e-08!4;CL:0002547!3.67e-08!4;CL:0002557!3.79e-08!1;CL:0002594!4.23e-08!4;CL:0000048!1.20e-07!430;CL:0000723!1.77e-07!436;CL:0000034!2.95e-07!444;CL:0002539!3.93e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002589;7.14e-26;2!CL:1000306;8.81e-14;4!CL:0002547;8.81e-14;4!CL:0000569;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,5.56e-26,2;CL:1000306,8.82e-14,4;CL:0002547,8.82e-14,4;CL:0000569,1.29e-13,4;CL:0000011,1.29e-13,4;CL:0000359,3.06e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000011;1.13e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!4.42e-31!14;DOID:120!1.28e-15!27;DOID:193!1.82e-14!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.25e-26!42;UBERON:0003509!1.25e-26!42;UBERON:0004572!1.25e-26!42;UBERON:0002118!4.03e-23!5;UBERON:0004532!4.03e-23!5;UBERON:0004573!1.97e-20!33;UBERON:0004571!1.97e-20!33;UBERON:0000992!3.89e-19!13;UBERON:0004872!5.34e-19!84;UBERON:0001981!6.45e-18!60;UBERON:0007500!6.45e-18!60;UBERON:0004537!6.45e-18!60;UBERON:0006965!6.45e-18!60;UBERON:0003914!2.34e-16!118;UBERON:0001529!1.45e-15!2;UBERON:0007204!1.45e-15!2;UBERON:0000055!2.90e-15!69;UBERON:0004535!8.87e-14!110;UBERON:0003498!1.33e-13!5;UBERON:0005985!1.33e-13!5;UBERON:0001009!2.49e-13!113;UBERON:0002049!5.03e-13!79;UBERON:0007798!5.03e-13!79;UBERON:0000991!1.14e-11!21;UBERON:0009196!1.14e-11!21;UBERON:0009117!1.14e-11!21;UBERON:0005564!1.14e-11!21;UBERON:0004176!4.06e-11!22;UBERON:0001621!6.79e-11!3;UBERON:0000948!1.85e-10!24;UBERON:0005498!1.85e-10!24;UBERON:0004140!1.85e-10!24;UBERON:0009881!1.85e-10!24;UBERON:0004141!1.85e-10!24;UBERON:0003084!1.85e-10!24;UBERON:0007005!1.85e-10!24;UBERON:0004139!1.85e-10!24;UBERON:0004291!1.85e-10!24;UBERON:0001134!2.89e-10!61;UBERON:0002036!2.89e-10!61;UBERON:0003082!2.89e-10!61;UBERON:0002385!6.92e-10!63;UBERON:0001015!6.92e-10!63;UBERON:0000383!6.92e-10!63;UBERON:0007100!3.08e-09!27;UBERON:0004290!9.89e-09!70;UBERON:0001282!1.48e-08!1;UBERON:0009842!1.48e-08!1;UBERON:0003704!1.48e-08!1;UBERON:0001171!1.48e-08!1;UBERON:0001172!1.48e-08!1;UBERON:0000025!1.58e-08!194;UBERON:0000947!1.65e-08!21;UBERON:0010191!1.65e-08!21;UBERON:0000415!3.67e-08!4;UBERON:0007240!3.67e-08!4;UBERON:0005742!3.67e-08!4;UBERON:0005734!3.67e-08!4;UBERON:0004664!3.67e-08!4;UBERON:0004663!3.67e-08!4;UBERON:0001310!4.23e-08!4;UBERON:0002119!6.95e-08!4;UBERON:0004531!6.95e-08!4;UBERON:0000486!3.27e-07!82;UBERON:0004237!3.93e-07!10;UBERON:0004695!3.93e-07!10;UBERON:0002111!3.93e-07!10;UBERON:0004178!3.93e-07!10;UBERON:0000914!4.18e-07!83;UBERON:0002329!4.18e-07!83;UBERON:0003077!4.18e-07!83;UBERON:0003059!4.18e-07!83;UBERON:0007282!4.18e-07!83;UBERON:0009618!4.18e-07!83;UBERON:0007285!4.18e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;7.14e-26;2!UBERON:0007204;7.14e-26;2!UBERON:0004797;8.81e-14;4!UBERON:0000415;8.81e-14;4!UBERON:0007240;8.81e-14;4!UBERON:0005742;8.81e-14;4!UBERON:0005734;8.81e-14;4!UBERON:0004664;8.81e-14;4!UBERON:0004663;8.81e-14;4!UBERON:0001637;3.22e-11;42!UBERON:0003509;3.22e-11;42!UBERON:0004572;3.22e-11;42!UBERON:0000947;1.61e-10;21!UBERON:0010191;1.61e-10;21!UBERON:0004573;2.05e-10;33!UBERON:0004571;2.05e-10;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.56e-26,2;UBERON:0007204,5.56e-26,2;UBERON:0004573,2.01e-14,33;UBERON:0004571,2.01e-14,33;UBERON:0000415,8.82e-14,4;UBERON:0007240,8.82e-14,4;UBERON:0005742,8.82e-14,4;UBERON:0005734,8.82e-14,4;UBERON:0004664,8.82e-14,4;UBERON:0004663,8.82e-14,4;UBERON:0001637,1.56e-11,42;UBERON:0003509,1.56e-11,42;UBERON:0004572,1.56e-11,42;UBERON:0000947,1.61e-10,21;UBERON:0010191,1.61e-10,21;UBERON:0004872,2.17e-10,83;UBERON:0007500,1.83e-08,59;UBERON:0001981,1.83e-08,59;UBERON:0004537,1.83e-08,59;UBERON:0006965,1.83e-08,59;UBERON:0004797,1.89e-08,7;UBERON:0004535,4.22e-08,109;UBERON:0001009,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0000055,1.88e-07,68 | |||
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|short_description=p@chr6:121837348..121837351,+ | |||
}} | }} |
Latest revision as of 18:53, 30 July 2015
Short description: | p@chr6:121837348..121837351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:121837348..121837351, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 5.56e-26 | 2 |
fibroblast of tunica adventitia of artery | 8.82e-14 | 4 |
fibroblast of the aortic adventitia | 8.82e-14 | 4 |
cardiac mesenchymal cell | 1.29e-13 | 4 |
migratory trunk neural crest cell | 1.29e-13 | 4 |
vascular associated smooth muscle cell | 3.06e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 5.56e-26 | 2 |
brachiocephalic vasculature | 5.56e-26 | 2 |
systemic artery | 2.01e-14 | 33 |
systemic arterial system | 2.01e-14 | 33 |
artery wall | 8.82e-14 | 4 |
tunica adventitia of artery | 8.82e-14 | 4 |
adventitia | 8.82e-14 | 4 |
tunica adventitia of blood vessel | 8.82e-14 | 4 |
aorta tunica adventitia | 8.82e-14 | 4 |
aorta wall | 8.82e-14 | 4 |
artery | 1.56e-11 | 42 |
arterial blood vessel | 1.56e-11 | 42 |
arterial system | 1.56e-11 | 42 |
aorta | 1.61e-10 | 21 |
aortic system | 1.61e-10 | 21 |
splanchnic layer of lateral plate mesoderm | 2.17e-10 | 83 |
epithelial tube open at both ends | 1.83e-08 | 59 |
blood vessel | 1.83e-08 | 59 |
blood vasculature | 1.83e-08 | 59 |
vascular cord | 1.83e-08 | 59 |
blood vessel layer | 1.89e-08 | 7 |
cardiovascular system | 4.22e-08 | 109 |
circulatory system | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
vessel | 1.88e-07 | 68 |