FFCP PHASE1:Hg19::chr6:121756777..121756800,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:121756777..121756800,+ to FFCP PHASE1:Hg19::chr6:121756777..121756800,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2697 | |EntrezGene=2697 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4274 | |HGNC=4274 | ||
|TSSclassifier=strong | |||
|UniProt=B4DN50 | |UniProt=B4DN50 | ||
|association_with_transcript=0bp_to_ENST00000440608_5end | |||
|cluster_id=chr6:121756777..121756800,+ | |||
|description=CAGE_peak_1_at_GJA1_5end | |||
|id=chr6:121756777..121756800,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-19!180;CL:0000393!2.33e-13!60;CL:0000211!2.33e-13!60;CL:0000187!3.52e-12!54;CL:0000680!3.92e-12!57;CL:0000056!3.92e-12!57;CL:0000355!3.92e-12!57;CL:0000222!6.02e-12!119;CL:0000192!8.02e-12!42;CL:0000514!8.02e-12!42;CL:0000359!1.62e-11!32;CL:0000183!8.69e-11!59;CL:0002321!6.81e-09!248;CL:0000220!1.71e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.72e-11;32!CL:0000192;1.31e-08;43!CL:0000134;3.04e-07;55!CL:0000393;5.02e-07;61!CL:0000211;5.02e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.65e-13,61;CL:0000211,1.65e-13,61;CL:0000187,2.59e-12,55;CL:0000680,2.86e-12,58;CL:0000056,2.86e-12,58;CL:0000355,2.86e-12,58;CL:0000192,6.36e-12,43;CL:0000514,6.36e-12,43;CL:0000222,6.83e-12,121;CL:0000359,1.23e-11,32;CL:0002321,1.12e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.31e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!6.06e-23!312;UBERON:0000483!1.32e-22!309;UBERON:0004111!1.02e-20!241;UBERON:0000477!1.12e-20!286;UBERON:0000468!7.44e-19!659;UBERON:0000475!9.22e-19!365;UBERON:0002049!1.69e-17!79;UBERON:0007798!1.69e-17!79;UBERON:0000025!2.20e-17!194;UBERON:0004121!9.80e-17!169;UBERON:0000914!2.61e-16!83;UBERON:0002329!2.61e-16!83;UBERON:0003077!2.61e-16!83;UBERON:0003059!2.61e-16!83;UBERON:0007282!2.61e-16!83;UBERON:0009618!2.61e-16!83;UBERON:0007285!2.61e-16!83;UBERON:0000924!8.07e-16!173;UBERON:0006601!8.07e-16!173;UBERON:0000033!8.35e-16!123;UBERON:0000481!1.17e-15!347;UBERON:0004872!1.43e-15!84;UBERON:0005743!3.19e-15!86;UBERON:0001017!4.57e-15!82;UBERON:0003075!5.37e-15!86;UBERON:0007284!5.37e-15!86;UBERON:0001981!8.83e-15!60;UBERON:0007500!8.83e-15!60;UBERON:0004537!8.83e-15!60;UBERON:0006965!8.83e-15!60;UBERON:0000055!1.03e-14!69;UBERON:0000153!1.78e-14!129;UBERON:0007811!1.78e-14!129;UBERON:0000467!3.47e-14!625;UBERON:0001049!4.40e-14!57;UBERON:0005068!4.40e-14!57;UBERON:0006241!4.40e-14!57;UBERON:0007135!4.40e-14!57;UBERON:0001637!5.27e-14!42;UBERON:0003509!5.27e-14!42;UBERON:0004572!5.27e-14!42;UBERON:0000480!6.59e-14!626;UBERON:0002616!9.74e-14!59;UBERON:0002346!1.12e-13!90;UBERON:0000922!4.60e-13!612;UBERON:0000073!4.95e-13!94;UBERON:0001016!4.95e-13!94;UBERON:0000955!1.60e-12!69;UBERON:0006238!1.60e-12!69;UBERON:0004290!2.56e-12!70;UBERON:0000486!7.04e-12!82;UBERON:0001009!9.79e-12!113;UBERON:0004535!1.04e-11!110;UBERON:0001134!1.04e-11!61;UBERON:0002036!1.04e-11!61;UBERON:0003082!1.04e-11!61;UBERON:0002385!1.62e-11!63;UBERON:0001015!1.62e-11!63;UBERON:0000383!1.62e-11!63;UBERON:0004573!4.27e-11!33;UBERON:0004571!4.27e-11!33;UBERON:0002050!4.28e-11!605;UBERON:0005423!4.28e-11!605;UBERON:0000923!9.57e-11!604;UBERON:0005291!9.57e-11!604;UBERON:0006598!9.57e-11!604;UBERON:0002532!9.57e-11!604;UBERON:0005256!1.25e-10!143;UBERON:0003080!1.90e-10!42;UBERON:0002780!2.38e-10!41;UBERON:0001890!2.38e-10!41;UBERON:0006240!2.38e-10!41;UBERON:0003056!5.84e-10!61;UBERON:0002020!5.99e-10!34;UBERON:0003528!5.99e-10!34;UBERON:0002791!2.21e-09!33;UBERON:0001893!2.55e-09!34;UBERON:0007023!5.74e-09!115;UBERON:0003914!7.58e-09!118;UBERON:0001869!1.49e-08!32;UBERON:0000490!3.91e-08!138;UBERON:0000947!3.71e-07!21;UBERON:0010191!3.71e-07!21;UBERON:0000064!7.45e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.24e-11;42!UBERON:0003509;5.24e-11;42!UBERON:0004572;5.24e-11;42!UBERON:0004573;2.24e-10;33!UBERON:0004571;2.24e-10;33!UBERON:0003528;1.38e-08;34!UBERON:0002020;1.38e-08;34!UBERON:0002791;1.77e-08;32!UBERON:0002049;2.85e-08;75!UBERON:0007798;2.85e-08;75!UBERON:0001893;3.29e-08;34!UBERON:0001869;5.23e-08;32!UBERON:0002780;5.32e-08;41!UBERON:0001890;5.32e-08;41!UBERON:0007500;5.38e-08;56!UBERON:0001981;5.38e-08;56!UBERON:0004537;5.38e-08;56!UBERON:0000055;7.63e-08;65!UBERON:0000073;1.15e-07;53!UBERON:0002616;1.15e-07;53!UBERON:0000947;3.45e-07;21!UBERON:0010191;3.45e-07;21 | |||
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| ||
|short_description=p1@GJA1 | |||
}} | }} |
Latest revision as of 04:01, 20 September 2015
Short description: | p1@GJA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GJA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000440608_5end |
EntrezGene: | GJA1 |
HGNC: | 4274 |
UniProt: | B4DN50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.65e-13 | 61 |
electrically active cell | 1.65e-13 | 61 |
muscle cell | 2.59e-12 | 55 |
muscle precursor cell | 2.86e-12 | 58 |
myoblast | 2.86e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.86e-12 | 58 |
smooth muscle cell | 6.36e-12 | 43 |
smooth muscle myoblast | 6.36e-12 | 43 |
mesodermal cell | 6.83e-12 | 121 |
vascular associated smooth muscle cell | 1.23e-11 | 32 |
embryonic cell | 1.12e-08 | 250 |