FFCP PHASE1:Hg19::chr6:121655593..121655661,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:121655593..121655661,- to FFCP PHASE1:Hg19::chr6:121655593..121655661,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221322 | |EntrezGene=221322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21485 | |HGNC=21485 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NH3 | |UniProt=Q96NH3 | ||
|association_with_transcript=0bp_to_ENST00000398212,ENST00000464622,NM_152730,uc003pyo.1,uc003pyq.1_5end | |||
|cluster_id=chr6:121655593..121655661,- | |||
|description=CAGE_peak_1_at_C6orf170_5end | |||
|id=chr6:121655593..121655661,- | |||
|ontology_enrichment_celltype=CL:0000838!1.71e-12!52;CL:0000542!2.22e-12!53;CL:0000051!2.22e-12!53;CL:0000945!1.64e-08!24;CL:0000826!1.64e-08!24;CL:0000236!8.33e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.48e-09;24!CL:0000542;6.66e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.56e-12,52;CL:0000542,2.02e-12,53;CL:0000051,2.02e-12,53;CL:0000945,1.55e-08,24;CL:0000826,1.55e-08,24;CL:0000236,7.96e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;6.66e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,8.99e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.99e-12!41;UBERON:0001890!1.99e-12!41;UBERON:0006240!1.99e-12!41;UBERON:0003080!9.66e-12!42;UBERON:0000073!1.72e-11!94;UBERON:0001016!1.72e-11!94;UBERON:0001049!2.17e-11!57;UBERON:0005068!2.17e-11!57;UBERON:0006241!2.17e-11!57;UBERON:0007135!2.17e-11!57;UBERON:0001017!8.40e-11!82;UBERON:0000955!1.30e-10!69;UBERON:0006238!1.30e-10!69;UBERON:0002616!2.03e-10!59;UBERON:0001893!5.60e-10!34;UBERON:0002020!8.54e-10!34;UBERON:0003528!8.54e-10!34;UBERON:0005743!1.30e-09!86;UBERON:0002791!1.38e-09!33;UBERON:0001869!2.09e-09!32;UBERON:0007023!4.39e-09!115;UBERON:0002346!2.80e-08!90;UBERON:0000153!1.11e-07!129;UBERON:0007811!1.11e-07!129;UBERON:0000924!1.61e-07!173;UBERON:0006601!1.61e-07!173;UBERON:0003075!2.60e-07!86;UBERON:0007284!2.60e-07!86;UBERON:0003056!4.48e-07!61;UBERON:0002619!6.17e-07!22;UBERON:0004121!9.59e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.36e-09;41!UBERON:0001890;4.36e-09;41!UBERON:0003528;2.09e-08;34!UBERON:0002020;2.09e-08;34!UBERON:0002791;2.61e-08;32!UBERON:0001869;3.11e-08;32!UBERON:0001893;3.12e-08;34!UBERON:0000073;1.49e-07;53!UBERON:0002616;1.49e-07;53!UBERON:0002619;8.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.60e-13,89;UBERON:0002780,1.81e-12,41;UBERON:0001890,1.81e-12,41;UBERON:0003080,1.81e-12,41;UBERON:0006240,1.81e-12,41;UBERON:0001049,5.49e-12,56;UBERON:0005068,5.49e-12,56;UBERON:0006241,5.49e-12,56;UBERON:0007135,5.49e-12,56;UBERON:0001017,2.54e-11,81;UBERON:0000073,2.59e-11,53;UBERON:0002616,2.59e-11,53;UBERON:0000955,3.55e-11,68;UBERON:0006238,3.55e-11,68;UBERON:0001893,5.21e-10,34;UBERON:0003528,7.95e-10,34;UBERON:0002020,7.95e-10,34;UBERON:0002791,1.84e-09,32;UBERON:0001869,1.95e-09,32;UBERON:0007023,7.10e-09,114;UBERON:0003056,1.11e-07,61;UBERON:0002346,2.00e-07,86;UBERON:0002619,5.89e-07,22;UBERON:0004121,8.35e-07,171;UBERON:0000924,8.35e-07,171;UBERON:0006601,8.35e-07,171 | |||
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| ||
|short_description=p1@C6orf170 | |||
}} | }} |
Latest revision as of 03:56, 20 September 2015
Short description: | p1@C6orf170 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C6orf170_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398212, ENST00000464622, NM_152730, uc003pyo.1, uc003pyq.1_5end |
EntrezGene: | C6orf170 |
HGNC: | 21485 |
UniProt: | Q96NH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.56e-12 | 52 |
lymphocyte | 2.02e-12 | 53 |
common lymphoid progenitor | 2.02e-12 | 53 |
lymphocyte of B lineage | 1.55e-08 | 24 |
pro-B cell | 1.55e-08 | 24 |
B cell | 7.96e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.60e-13 | 89 |
regional part of forebrain | 1.81e-12 | 41 |
forebrain | 1.81e-12 | 41 |
anterior neural tube | 1.81e-12 | 41 |
future forebrain | 1.81e-12 | 41 |
neural tube | 5.49e-12 | 56 |
neural rod | 5.49e-12 | 56 |
future spinal cord | 5.49e-12 | 56 |
neural keel | 5.49e-12 | 56 |
central nervous system | 2.54e-11 | 81 |
regional part of nervous system | 2.59e-11 | 53 |
regional part of brain | 2.59e-11 | 53 |
brain | 3.55e-11 | 68 |
future brain | 3.55e-11 | 68 |
telencephalon | 5.21e-10 | 34 |
brain grey matter | 7.95e-10 | 34 |
gray matter | 7.95e-10 | 34 |
regional part of telencephalon | 1.84e-09 | 32 |
cerebral hemisphere | 1.95e-09 | 32 |
adult organism | 7.10e-09 | 114 |
pre-chordal neural plate | 1.11e-07 | 61 |
neurectoderm | 2.00e-07 | 86 |
regional part of cerebral cortex | 5.89e-07 | 22 |
ectoderm-derived structure | 8.35e-07 | 171 |
ectoderm | 8.35e-07 | 171 |
presumptive ectoderm | 8.35e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 8.99e-07 | 137 |