FFCP PHASE1:Hg19::chr6:114181739..114181879,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:114181739..114181879,+ to FFCP PHASE1:Hg19::chr6:114181739..114181879,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:114181739..114181879,+ | |||
|coexpression_cluster_id=C1258 | |||
|description=CAGE_peak_at_chr6:114181739..114181879,+ | |||
|id=chr6:114181739..114181879,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.72e-12!42;CL:0000860!2.08e-09!45;CL:0002009!4.99e-08!65;CL:0002194!5.06e-08!63;CL:0000576!5.06e-08!63;CL:0000040!5.06e-08!63;CL:0000559!5.06e-08!63;CL:0000055!5.82e-08!180;CL:0000766!6.91e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.55e-11;33!CL:0002057;2.55e-11;33!CL:0000473;4.41e-11;39!CL:0000234;4.41e-11;39!CL:0000576;1.06e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.95e-14,48;CL:0000234,3.95e-14,48;CL:0000860,4.63e-12,42;CL:0002057,4.63e-12,42;CL:0002194,1.43e-09,59;CL:0000576,1.43e-09,59;CL:0000040,1.43e-09,59;CL:0000559,1.43e-09,59;CL:0002009,1.52e-09,61;CL:0000766,5.26e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.14e-11!659;UBERON:0000480!1.59e-09!626;UBERON:0000467!1.74e-09!625;UBERON:0000922!2.21e-09!612;UBERON:0002050!4.09e-09!605;UBERON:0005423!4.09e-09!605;UBERON:0000923!7.70e-09!604;UBERON:0005291!7.70e-09!604;UBERON:0006598!7.70e-09!604;UBERON:0002532!7.70e-09!604;UBERON:0002204!1.12e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000923,2.12e-11,560;UBERON:0010316,2.12e-11,560;UBERON:0005291,2.12e-11,560;UBERON:0006598,2.12e-11,560;UBERON:0010317,2.12e-11,560;UBERON:0002532,2.12e-11,560;UBERON:0002050,3.09e-11,564;UBERON:0000922,4.76e-10,592;UBERON:0005423,1.30e-09,581;UBERON:0002204,5.14e-09,167 | |||
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| ||
|short_description=p@chr6:114181739..114181879,+ | |||
}} | }} |
Latest revision as of 18:33, 30 July 2015
Short description: | p@chr6:114181739..114181879, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:114181739..114181879, + |
Coexpression cluster: | C1258_CD14_Monocytederived_Aortic_Olfactory_spinal_occipital_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.95e-14 | 48 |
phagocyte | 3.95e-14 | 48 |
classical monocyte | 4.63e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.63e-12 | 42 |
monopoietic cell | 1.43e-09 | 59 |
monocyte | 1.43e-09 | 59 |
monoblast | 1.43e-09 | 59 |
promonocyte | 1.43e-09 | 59 |
macrophage dendritic cell progenitor | 1.52e-09 | 61 |
myeloid leukocyte | 5.26e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
germ layer | 2.12e-11 | 560 |
germ layer / neural crest | 2.12e-11 | 560 |
embryonic tissue | 2.12e-11 | 560 |
presumptive structure | 2.12e-11 | 560 |
germ layer / neural crest derived structure | 2.12e-11 | 560 |
epiblast (generic) | 2.12e-11 | 560 |
embryonic structure | 3.09e-11 | 564 |
embryo | 4.76e-10 | 592 |
developing anatomical structure | 1.30e-09 | 581 |
musculoskeletal system | 5.14e-09 | 167 |