FFCP PHASE1:Hg19::chr6:108880956..108881011,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:108880956..108881011,+ to FFCP PHASE1:Hg19::chr6:108880956..108881011,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2309 | |EntrezGene=2309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3821 | |HGNC=3821 | ||
|TSSclassifier=strong | |||
|UniProt=O43524 | |UniProt=O43524 | ||
|association_with_transcript=-14bp_to_NM_201559,uc003psk.2,uc003psn.2_5end | |||
|cluster_id=chr6:108880956..108881011,+ | |||
|description=CAGE_peak_1_at_FOXO3_5end | |||
|id=chr6:108880956..108881011,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.37e-12!172;CL:0000566!2.37e-12!172;CL:0000988!7.70e-12!182;CL:0000738!5.95e-11!140;CL:0002032!1.96e-10!165;CL:0000837!1.96e-10!165;CL:0002031!5.43e-08!124;CL:0000763!7.11e-08!112;CL:0000049!7.11e-08!112;CL:0000791!1.34e-07!18;CL:0000789!1.34e-07!18;CL:0002420!1.34e-07!18;CL:0002419!1.34e-07!18;CL:0000790!1.34e-07!18;CL:0002087!7.55e-07!119;CL:0002393!8.27e-07!9;CL:0002397!8.27e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.58e-08;18!CL:0000789;9.58e-08;18!CL:0002419;9.58e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.62e-13,168;CL:0000988,3.34e-13,177;CL:0000738,3.64e-12,136;CL:0002032,1.68e-11,161;CL:0000837,1.68e-11,161;CL:0002031,4.79e-09,120;CL:0000763,5.60e-09,108;CL:0000049,5.60e-09,108;CL:0002087,8.25e-08,115;CL:0000791,1.34e-07,18;CL:0000789,1.34e-07,18;CL:0002420,1.34e-07,18;CL:0002419,1.34e-07,18;CL:0000790,1.34e-07,18;CL:0000766,2.01e-07,72;CL:0002393,8.26e-07,9;CL:0002397,8.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;9.58e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.18e-39!115;UBERON:0001049!7.63e-15!57;UBERON:0005068!7.63e-15!57;UBERON:0006241!7.63e-15!57;UBERON:0007135!7.63e-15!57;UBERON:0002616!2.56e-13!59;UBERON:0002780!5.56e-13!41;UBERON:0001890!5.56e-13!41;UBERON:0006240!5.56e-13!41;UBERON:0003080!1.03e-12!42;UBERON:0000955!1.02e-11!69;UBERON:0006238!1.02e-11!69;UBERON:0001893!1.07e-11!34;UBERON:0002791!3.53e-11!33;UBERON:0001869!4.20e-11!32;UBERON:0001017!5.49e-11!82;UBERON:0002020!7.39e-11!34;UBERON:0003528!7.39e-11!34;UBERON:0005743!2.21e-10!86;UBERON:0002619!2.96e-10!22;UBERON:0001950!8.05e-10!20;UBERON:0000073!8.42e-10!94;UBERON:0001016!8.42e-10!94;UBERON:0000956!3.93e-09!25;UBERON:0000203!3.93e-09!25;UBERON:0002390!1.81e-08!102;UBERON:0003061!1.81e-08!102;UBERON:0002346!8.46e-08!90;UBERON:0000178!8.60e-08!15;UBERON:0000179!8.60e-08!15;UBERON:0000463!8.60e-08!15;UBERON:0003075!1.02e-07!86;UBERON:0007284!1.02e-07!86;UBERON:0002193!4.42e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.17e-10;114!UBERON:0002619;2.59e-10;22!UBERON:0001893;3.39e-10;34!UBERON:0001869;4.39e-10;32!UBERON:0001950;6.94e-10;20!UBERON:0002791;8.46e-10;32!UBERON:0002780;1.36e-09;41!UBERON:0001890;1.36e-09;41!UBERON:0003528;2.01e-09;34!UBERON:0002020;2.01e-09;34!UBERON:0000956;3.14e-09;25!UBERON:0000203;3.14e-09;25!UBERON:0000073;4.72e-09;53!UBERON:0002616;4.72e-09;53!UBERON:0000178;1.53e-07;15!UBERON:0000179;1.53e-07;15!UBERON:0000463;1.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.45e-38,114;UBERON:0001049,4.46e-15,56;UBERON:0005068,4.46e-15,56;UBERON:0006241,4.46e-15,56;UBERON:0007135,4.46e-15,56;UBERON:0000073,5.45e-15,53;UBERON:0002616,5.45e-15,53;UBERON:0002780,5.56e-13,41;UBERON:0001890,5.56e-13,41;UBERON:0003080,5.56e-13,41;UBERON:0006240,5.56e-13,41;UBERON:0000955,7.33e-12,68;UBERON:0006238,7.33e-12,68;UBERON:0001893,1.07e-11,34;UBERON:0001869,4.20e-11,32;UBERON:0001017,4.25e-11,81;UBERON:0003528,7.38e-11,34;UBERON:0002020,7.38e-11,34;UBERON:0002791,9.69e-11,32;UBERON:0001016,2.03e-10,89;UBERON:0002619,2.96e-10,22;UBERON:0001950,8.05e-10,20;UBERON:0002390,1.07e-09,98;UBERON:0003061,1.07e-09,98;UBERON:0000956,3.92e-09,25;UBERON:0000203,3.92e-09,25;UBERON:0002346,8.56e-09,86;UBERON:0003075,9.77e-09,82;UBERON:0007284,9.77e-09,82;UBERON:0002193,4.17e-08,108;UBERON:0000178,8.60e-08,15;UBERON:0000179,8.60e-08,15;UBERON:0000463,8.60e-08,15;UBERON:0003056,5.21e-07,61 | |||
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| ||
|short_description=p1@FOXO3 | |||
}} | }} |
Latest revision as of 17:28, 19 September 2015
Short description: | p1@FOXO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXO3_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_NM_201559, uc003psk.2, uc003psn.2_5end |
EntrezGene: | FOXO3 |
HGNC: | 3821 |
UniProt: | O43524 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.62e-13 | 168 |
hematopoietic cell | 3.34e-13 | 177 |
leukocyte | 3.64e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 4.79e-09 | 120 |
myeloid cell | 5.60e-09 | 108 |
common myeloid progenitor | 5.60e-09 | 108 |
nongranular leukocyte | 8.25e-08 | 115 |
mature alpha-beta T cell | 1.34e-07 | 18 |
alpha-beta T cell | 1.34e-07 | 18 |
immature T cell | 1.34e-07 | 18 |
mature T cell | 1.34e-07 | 18 |
immature alpha-beta T cell | 1.34e-07 | 18 |
myeloid leukocyte | 2.01e-07 | 72 |
intermediate monocyte | 8.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.45e-38 | 114 |
neural tube | 4.46e-15 | 56 |
neural rod | 4.46e-15 | 56 |
future spinal cord | 4.46e-15 | 56 |
neural keel | 4.46e-15 | 56 |
regional part of nervous system | 5.45e-15 | 53 |
regional part of brain | 5.45e-15 | 53 |
regional part of forebrain | 5.56e-13 | 41 |
forebrain | 5.56e-13 | 41 |
anterior neural tube | 5.56e-13 | 41 |
future forebrain | 5.56e-13 | 41 |
brain | 7.33e-12 | 68 |
future brain | 7.33e-12 | 68 |
telencephalon | 1.07e-11 | 34 |
cerebral hemisphere | 4.20e-11 | 32 |
central nervous system | 4.25e-11 | 81 |
brain grey matter | 7.38e-11 | 34 |
gray matter | 7.38e-11 | 34 |
regional part of telencephalon | 9.69e-11 | 32 |
nervous system | 2.03e-10 | 89 |
regional part of cerebral cortex | 2.96e-10 | 22 |
neocortex | 8.05e-10 | 20 |
hematopoietic system | 1.07e-09 | 98 |
blood island | 1.07e-09 | 98 |
cerebral cortex | 3.92e-09 | 25 |
pallium | 3.92e-09 | 25 |
neurectoderm | 8.56e-09 | 86 |
neural plate | 9.77e-09 | 82 |
presumptive neural plate | 9.77e-09 | 82 |
hemolymphoid system | 4.17e-08 | 108 |
blood | 8.60e-08 | 15 |
haemolymphatic fluid | 8.60e-08 | 15 |
organism substance | 8.60e-08 | 15 |
pre-chordal neural plate | 5.21e-07 | 61 |