FFCP PHASE1:Hg19::chr6:10529983..10530000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000485764_5end | |||
|cluster_id=chr6:10529983..10530000,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_13_at_GCNT2_5end | |||
|id=chr6:10529983..10530000,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.33e-09!65;CL:0000557!1.47e-09!71;CL:0002057!1.90e-09!42;CL:0000860!2.82e-09!45;CL:0000453!1.02e-08!5;CL:0002194!4.02e-08!63;CL:0000576!4.02e-08!63;CL:0000040!4.02e-08!63;CL:0000559!4.02e-08!63;CL:0000839!6.59e-08!70;CL:0000766!9.98e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002567;7.29e-23;3!CL:0000148;1.61e-18;10!CL:0001014;1.09e-16;2!CL:0001016;1.09e-16;2!CL:0000453;1.13e-14;5!CL:0000147;3.43e-13;14!CL:0000075;1.15e-12;27!CL:0000710;3.53e-09;20!CL:0002566;1.17e-08;1!CL:0000990;2.29e-08;8!CL:0000451;6.39e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.86e-23,3;CL:0000148,8.95e-19,10;CL:0000541,8.95e-19,10;CL:0001014,1.09e-16,2;CL:0001016,1.09e-16,2;CL:0000453,1.13e-14,5;CL:0000147,2.27e-13,14;CL:0000075,8.79e-13,27;CL:0000710,2.66e-09,20;CL:0002566,9.02e-09,1;CL:0000990,2.29e-08,8;CL:0000451,6.39e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.81e-07;10!UBERON:0007687;2.81e-07;10 | |||
|ontology_enrichment_disease=DOID:305!1.12e-11!106;DOID:0050687!4.58e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.19e-12!9;UBERON:0008947!1.09e-09!38;UBERON:0003258!1.09e-09!38;UBERON:0002371!1.37e-07!80;UBERON:0001474!4.10e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p13@GCNT2 | |||
}} | }} |
Latest revision as of 13:43, 19 September 2015
Short description: | p13@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GCNT2_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -29bp_to_ENST00000485764_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.86e-23 | 3 |
melanocyte | 8.95e-19 | 10 |
melanoblast | 8.95e-19 | 10 |
CD1a-positive Langerhans cell | 1.09e-16 | 2 |
immature CD1a-positive Langerhans cell | 1.09e-16 | 2 |
Langerhans cell | 1.13e-14 | 5 |
pigment cell | 2.27e-13 | 14 |
columnar/cuboidal epithelial cell | 8.79e-13 | 27 |
neurecto-epithelial cell | 2.66e-09 | 20 |
dark melanocyte | 9.02e-09 | 1 |
conventional dendritic cell | 2.29e-08 | 8 |
dendritic cell | 6.39e-07 | 10 |