FFCP PHASE1:Hg19::chr6:10528991..10529025,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10528991..10529025,+ to FFCP PHASE1:Hg19::chr6:10528991..10529025,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0V5 | |UniProt=Q8N0V5 | ||
|association_with_transcript=402bp_to_ENST00000379597,uc003mzc.3_5end | |||
|cluster_id=chr6:10528991..10529025,+ | |||
|description=CAGE_peak_9_at_GCNT2_5end | |||
|id=chr6:10528991..10529025,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.97e-53!140;CL:0002087!8.25e-52!119;CL:0002031!4.12e-47!124;CL:0000037!1.37e-44!172;CL:0000566!1.37e-44!172;CL:0000988!6.21e-41!182;CL:0002032!1.26e-40!165;CL:0000837!1.26e-40!165;CL:0002009!4.19e-39!65;CL:0002057!7.10e-39!42;CL:0000860!3.10e-38!45;CL:0002194!2.00e-37!63;CL:0000576!2.00e-37!63;CL:0000040!2.00e-37!63;CL:0000559!2.00e-37!63;CL:0000557!1.57e-35!71;CL:0000839!8.53e-33!70;CL:0000766!8.18e-32!76;CL:0000763!9.66e-26!112;CL:0000049!9.66e-26!112;CL:0000945!4.12e-19!24;CL:0000826!4.12e-19!24;CL:0000542!2.71e-13!53;CL:0000051!2.71e-13!53;CL:0000838!9.75e-13!52;CL:0000451!1.74e-10!10;CL:0000236!5.61e-10!14;CL:0000990!2.17e-08!8;CL:0002393!1.67e-07!9;CL:0002397!1.67e-07!9;CL:0000134!2.00e-07!358;CL:0002320!9.30e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.52e-67;33!CL:0002057;8.52e-67;33!CL:0000473;1.77e-48;39!CL:0000234;1.77e-48;39!CL:0000576;2.51e-40;48!CL:0000945;4.79e-33;24!CL:0000766;1.35e-20;69!CL:0002087;3.04e-20;104!CL:0000738;8.73e-17;136!CL:0000236;7.46e-16;13!CL:0000763;5.37e-13;100!CL:0000451;2.29e-11;10!CL:0000542;1.52e-10;53!CL:0000784;1.46e-09;3!CL:0000219;5.63e-09;193!CL:0000988;1.43e-08;177!CL:0000453;1.53e-08;5!CL:0000990;4.12e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.75e-71,136;CL:0000860,4.84e-64,42;CL:0002057,4.84e-64,42;CL:0002087,4.74e-62,115;CL:0002031,2.89e-61,120;CL:0000473,1.91e-58,48;CL:0000234,1.91e-58,48;CL:0000037,5.23e-57,168;CL:0002032,1.57e-55,161;CL:0000837,1.57e-55,161;CL:0002009,1.96e-54,61;CL:0002194,1.65e-53,59;CL:0000576,1.65e-53,59;CL:0000040,1.65e-53,59;CL:0000559,1.65e-53,59;CL:0000988,2.43e-53,177;CL:0000557,1.97e-51,67;CL:0000766,6.62e-50,72;CL:0000839,8.13e-47,66;CL:0000763,3.35e-39,108;CL:0000049,3.35e-39,108;CL:0000945,3.33e-33,24;CL:0000826,3.33e-33,24;CL:0000134,5.41e-19,354;CL:0002320,2.52e-18,361;CL:0000219,5.63e-16,386;CL:0000236,9.98e-15,14;CL:0000838,2.02e-14,52;CL:0000542,4.70e-14,53;CL:0000051,4.70e-14,53;CL:0000048,4.15e-13,427;CL:0000034,6.78e-13,441;CL:0000723,1.03e-12,433;CL:0000451,1.75e-11,10;CL:0000784,1.36e-09,3;CL:0000453,1.15e-08,5;CL:0000990,3.38e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.70e-45;42!CL:0000049;5.81e-13;108!CL:0000051;1.52e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.96e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.44e-39!102;UBERON:0003061!3.44e-39!102;UBERON:0002193!1.01e-37!112;UBERON:0002371!5.90e-32!80;UBERON:0002405!2.74e-30!115;UBERON:0001474!4.06e-28!86;UBERON:0004765!1.17e-20!101;UBERON:0001434!1.17e-20!101;UBERON:0003081!2.54e-08!216;UBERON:0007023!5.42e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.51e-47,76;UBERON:0001474,1.18e-42,82;UBERON:0002390,8.04e-40,98;UBERON:0003061,8.04e-40,98;UBERON:0004765,6.29e-38,90;UBERON:0002405,2.31e-36,93;UBERON:0002193,4.29e-35,108;UBERON:0001434,4.45e-33,100;UBERON:0002384,2.05e-17,371;UBERON:0002204,1.25e-15,167;UBERON:0003081,1.61e-13,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.985207073399349,1.33808328233255,1.18009283054671,0,1.08371286321253,0,0,0.369754010166788,1.78174561334694,2.41687695228617,0.880801318004542,1.10799081706375,0.200544447470142,0.434021741431704,1.11957737119962,0.32389366601898,1.03030227053675,3.19876125315042,7.17964293008738,3.63876091781724,1.62700325833979,0.822335776043652,1.54853185447552,2.3015391385772,5.63553554364021,4.25668013799453,1.03423704220986,3.22742341791913,1.35426486594342,0.188242339542605,2.72906150057846,2.02251136000576,2.14258724659632,2.24650318953266,3.19668562899521,6.59702600373432,11.9678194572979,8.09827026012119,2.32167390902867,1.70215567407342,1.86846674698672,3.76872997885115,4.17186334736161,4.56096573880745,3.02699751316684,3.68277635987565,3.79754864929061,0.845021145247767,2.12604299965044,0.628975936525128,1.68492946719743,2.85336096398862,1.44653028027372,0.570025487482497,0.39783335439818,0.547992461293902,3.51992488922645,2.73069305631066,4.44754626931777,3.41384178053206,2.00197993518006,2.29900975981793,2.64417949113945,0.954053754535364,2.84606484554724,0.587237189370939,1.91136614062614,0,1.12101712596307,0.263384084775077,0.393419540227666,0,0,0.167186495390678,0,0,1.94826728407911,0,0,0.886135578334485,0.812411591295047,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0.766440987203842,0.68725489096526,0,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.26591592103773,2.38490624305342,4.57595928624102,5.57186251994347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,1.29694662238543,1.08006287447623,0.79312517629427,0.213648142254946,0,0.245040215981032,0.557409525377156,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,3.34330152832435,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,1.65770349318689,1.76352923497993,0,5.41573144028706,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0.32681539055697,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0.365446585430928,0.0821154570532092,0,0,0,0.137041924646751,0,0.126621591911757,0,0.240476460754601,0,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.410716136675979,1.27746588066972,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.157566364614447,0.164831716762333,0.26961417541674,0.196854963029498,1.18542664892098,0,0.272406812223151,0,0,0,0.899895566206002,1.5476039091159,0.182248669974074,0,0.394028536495991,0.0524545881349981,0.422401346077626,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.213574825135389,0,0.414239055347196,0,2.56895121467328,14.6151118057075,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,1.16916185303633,1.99297260470045,3.43487327937273,0.327609848846413,0.491545817507439,0.211312123358627,0,0,3.2720846135555,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.202612753855184,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.691403925334676,0.514464028312255,0.271878931907327,0.0657727735628491,0.236387681767936,0,0.156986185701028,0,0,0,0,1.9110067515482,0.1429530883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| ||
|short_description=p9@GCNT2 | |||
}} | }} |
Latest revision as of 13:41, 19 September 2015
Short description: | p9@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 402bp_to_ENST00000379597, uc003mzc.3_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q8N0V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.51e-47 | 76 |
bone element | 1.18e-42 | 82 |
hematopoietic system | 8.04e-40 | 98 |
blood island | 8.04e-40 | 98 |
skeletal element | 6.29e-38 | 90 |
immune system | 2.31e-36 | 93 |
hemolymphoid system | 4.29e-35 | 108 |
skeletal system | 4.45e-33 | 100 |
connective tissue | 2.05e-17 | 371 |
musculoskeletal system | 1.25e-15 | 167 |
lateral plate mesoderm | 1.61e-13 | 203 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.96e-07 | 10 |