FFCP PHASE1:Hg19::chr6:10412262..10412271,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000474952_5end | |||
|cluster_id=chr6:10412262..10412271,- | |||
|coexpression_cluster_id=C1318 | |||
|description=CAGE_peak_21_at_TFAP2A_5end | |||
|id=chr6:10412262..10412271,- | |||
|ontology_enrichment_celltype=CL:0000066!7.57e-21!254;CL:0000710!2.67e-14!20;CL:0000075!6.69e-13!27;CL:0002077!1.03e-12!33;CL:0000148!6.87e-12!10;CL:0000541!6.87e-12!10;CL:0000197!1.27e-08!6;CL:0000098!1.27e-08!6;CL:0002167!1.27e-08!6;CL:0000147!5.89e-08!14;CL:0002567!3.69e-07!3;CL:0000221!5.87e-07!71;CL:0000150!7.95e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000710;1.93e-56;20!CL:0000075;2.38e-51;27!CL:0002567;2.05e-43;3!CL:0000197;1.29e-37;6!CL:0000098;1.29e-37;6!CL:0002167;1.29e-37;6!CL:0000148;7.38e-36;10!CL:0002077;4.02e-29;34!CL:0000147;1.16e-25;14!CL:0002566;9.98e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,1.88e-56,20;CL:0000075,2.72e-51,27;CL:0002567,1.66e-43,3;CL:0000197,1.42e-37,6;CL:0000098,1.42e-37,6;CL:0002167,1.42e-37,6;CL:0000148,6.64e-36,10;CL:0000541,6.64e-36,10;CL:0002077,6.05e-33,34;CL:0000147,1.08e-25,14;CL:0000133,5.01e-18,59;CL:0002566,9.99e-16,1;CL:0000221,1.03e-14,72;CL:0000333,2.25e-08,41 | |||
|ontology_enrichment_development_v019=CL:0000133;3.90e-11;59!CL:0000221;9.78e-08;72 | |||
|ontology_enrichment_disease=DOID:0050687!1.02e-19!143;DOID:305!3.11e-13!106;DOID:162!1.36e-12!235;DOID:14566!5.42e-12!239 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.24e-29;2!DOID:3112;2.06e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.92e-29,2;DOID:3112,3.66e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0005156!2.96e-07!59;UBERON:0000990!2.96e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p21@TFAP2A | |||
}} | }} |
Latest revision as of 12:46, 19 September 2015
Short description: | p21@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TFAP2A_5end |
Coexpression cluster: | C1318_retina_Melanocyte_globus_caudate_eye_melanoma_nucleus |
Association with transcript: | 7bp_to_ENST00000474952_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 1.88e-56 | 20 |
columnar/cuboidal epithelial cell | 2.72e-51 | 27 |
light melanocyte | 1.66e-43 | 3 |
receptor cell | 1.42e-37 | 6 |
sensory epithelial cell | 1.42e-37 | 6 |
olfactory epithelial cell | 1.42e-37 | 6 |
melanocyte | 6.64e-36 | 10 |
melanoblast | 6.64e-36 | 10 |
ecto-epithelial cell | 6.05e-33 | 34 |
pigment cell | 1.08e-25 | 14 |
neurectodermal cell | 5.01e-18 | 59 |
dark melanocyte | 9.99e-16 | 1 |
ectodermal cell | 1.03e-14 | 72 |
migratory neural crest cell | 2.25e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.92e-29 | 2 |
papillary adenocarcinoma | 3.66e-15 | 1 |