FFCP PHASE1:Hg19::chr5:95067025..95067058,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:95067025..95067058,+ to FFCP PHASE1:Hg19::chr5:95067025..95067058,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier=strong | |||
|UniProt=O94955 | |UniProt=O94955 | ||
|association_with_transcript=146bp_to_ENST00000379982_5end | |||
|cluster_id=chr5:95067025..95067058,+ | |||
|coexpression_cluster_id=C1085 | |||
|description=CAGE_peak_1_at_RHOBTB3_5end | |||
|id=chr5:95067025..95067058,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.46e-22!180;CL:0000680!5.48e-13!57;CL:0000056!5.48e-13!57;CL:0000355!5.48e-13!57;CL:0000187!1.59e-12!54;CL:0000192!8.84e-12!42;CL:0000514!8.84e-12!42;CL:0000183!2.42e-11!59;CL:0000393!2.67e-10!60;CL:0000211!2.67e-10!60;CL:0000057!3.16e-10!75;CL:0000359!4.03e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.26e-08;43!CL:0000187;8.18e-08;55!CL:0000359;8.75e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.90e-13,58;CL:0000056,1.90e-13,58;CL:0000355,1.90e-13,58;CL:0000187,5.54e-13,55;CL:0000192,2.99e-12,43;CL:0000514,2.99e-12,43;CL:0000393,1.02e-10,61;CL:0000211,1.02e-10,61;CL:0000057,2.11e-10,76;CL:0000359,3.90e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.26e-08;43!CL:0000355;2.43e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.48e-23!365;UBERON:0000481!8.20e-17!347;UBERON:0000073!2.56e-15!94;UBERON:0001016!2.56e-15!94;UBERON:0005743!2.58e-14!86;UBERON:0000477!3.40e-14!286;UBERON:0000119!3.50e-14!312;UBERON:0000483!8.03e-14!309;UBERON:0000955!1.42e-13!69;UBERON:0006238!1.42e-13!69;UBERON:0000033!2.80e-13!123;UBERON:0001017!3.92e-13!82;UBERON:0002616!5.69e-13!59;UBERON:0003075!1.55e-12!86;UBERON:0007284!1.55e-12!86;UBERON:0004121!1.74e-12!169;UBERON:0000914!1.82e-12!83;UBERON:0002329!1.82e-12!83;UBERON:0003077!1.82e-12!83;UBERON:0003059!1.82e-12!83;UBERON:0007282!1.82e-12!83;UBERON:0009618!1.82e-12!83;UBERON:0007285!1.82e-12!83;UBERON:0001134!2.06e-12!61;UBERON:0002036!2.06e-12!61;UBERON:0003082!2.06e-12!61;UBERON:0004111!4.05e-12!241;UBERON:0000025!5.16e-12!194;UBERON:0000153!6.63e-12!129;UBERON:0007811!6.63e-12!129;UBERON:0002385!7.54e-12!63;UBERON:0001015!7.54e-12!63;UBERON:0000383!7.54e-12!63;UBERON:0000924!8.99e-12!173;UBERON:0006601!8.99e-12!173;UBERON:0001049!9.75e-12!57;UBERON:0005068!9.75e-12!57;UBERON:0006241!9.75e-12!57;UBERON:0007135!9.75e-12!57;UBERON:0002346!1.99e-11!90;UBERON:0004290!2.38e-11!70;UBERON:0005256!1.70e-10!143;UBERON:0003056!3.00e-10!61;UBERON:0000468!7.06e-10!659;UBERON:0002780!9.62e-10!41;UBERON:0001890!9.62e-10!41;UBERON:0006240!9.62e-10!41;UBERON:0003080!1.18e-09!42;UBERON:0000064!5.90e-09!219;UBERON:0001893!1.14e-08!34;UBERON:0002100!2.17e-08!216;UBERON:0002791!2.58e-08!33;UBERON:0002020!3.69e-08!34;UBERON:0003528!3.69e-08!34;UBERON:0001869!4.73e-08!32;UBERON:0000467!1.13e-07!625;UBERON:0000486!1.37e-07!82;UBERON:0000480!1.68e-07!626;UBERON:0000490!2.14e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.06e-07;34!UBERON:0002780;2.46e-07;41!UBERON:0001890;2.46e-07;41!UBERON:0001869;2.52e-07;32!UBERON:0002791;3.31e-07;32!UBERON:0003528;4.10e-07;34!UBERON:0002020;4.10e-07;34!UBERON:0001017;5.32e-07;75!UBERON:0000073;6.73e-07;53!UBERON:0002616;6.73e-07;53 | |||
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| ||
|short_description=p1@RHOBTB3 | |||
}} | }} |
Latest revision as of 07:46, 19 September 2015
Short description: | p1@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHOBTB3_5end |
Coexpression cluster: | C1085_liposarcoma_placenta_Olfactory_amniotic_Hair_mesothelioma_Smooth |
Association with transcript: | 146bp_to_ENST00000379982_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | O94955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.90e-13 | 58 |
myoblast | 1.90e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.90e-13 | 58 |
muscle cell | 5.54e-13 | 55 |
smooth muscle cell | 2.99e-12 | 43 |
smooth muscle myoblast | 2.99e-12 | 43 |
electrically responsive cell | 1.02e-10 | 61 |
electrically active cell | 1.02e-10 | 61 |
fibroblast | 2.11e-10 | 76 |
vascular associated smooth muscle cell | 3.90e-08 | 32 |