FFCP PHASE1:Hg19::chr5:88179017..88179046,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:88179017..88179046,- to FFCP PHASE1:Hg19::chr5:88179017..88179046,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4208 | |EntrezGene=4208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6996 | |HGNC=6996 | ||
|TSSclassifier=strong | |||
|UniProt=D6RG14 | |UniProt=D6RG14 | ||
|association_with_transcript=0bp_to_ENST00000503075,ENST00000509349,ENST00000514015,ENST00000514028_5end | |||
|cluster_id=chr5:88179017..88179046,- | |||
|coexpression_cluster_id=C1165 | |||
|description=CAGE_peak_2_at_MEF2C_5end | |||
|id=chr5:88179017..88179046,- | |||
|ontology_enrichment_celltype=CL:0000763!2.57e-17!112;CL:0000049!2.57e-17!112;CL:0000037!9.12e-17!172;CL:0000566!9.12e-17!172;CL:0002032!1.27e-15!165;CL:0000837!1.27e-15!165;CL:0000988!6.06e-15!182;CL:0000945!1.10e-12!24;CL:0000826!1.10e-12!24;CL:0002057!2.17e-11!42;CL:0002009!1.49e-10!65;CL:0002194!1.77e-10!63;CL:0000576!1.77e-10!63;CL:0000040!1.77e-10!63;CL:0000559!1.77e-10!63;CL:0000738!9.09e-10!140;CL:0000766!1.01e-09!76;CL:0002087!2.19e-09!119;CL:0000860!2.29e-09!45;CL:0000236!6.40e-09!14;CL:0000557!2.63e-08!71;CL:0000839!1.96e-07!70;CL:0002031!9.56e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.85e-13;24!CL:0000576;3.18e-09;48!CL:0000236;1.27e-08;13!CL:0000860;4.41e-08;33!CL:0002057;4.41e-08;33!CL:0000763;4.88e-08;100!CL:0000473;1.74e-07;39!CL:0000234;1.74e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.21e-19,108;CL:0000049,1.21e-19,108;CL:0000037,1.89e-19,168;CL:0002032,4.15e-18,161;CL:0000837,4.15e-18,161;CL:0000988,4.23e-17,177;CL:0000945,4.80e-13,24;CL:0000826,4.80e-13,24;CL:0002009,1.18e-12,61;CL:0002194,1.31e-12,59;CL:0000576,1.31e-12,59;CL:0000040,1.31e-12,59;CL:0000559,1.31e-12,59;CL:0000473,2.74e-12,48;CL:0000234,2.74e-12,48;CL:0000738,6.62e-12,136;CL:0000766,1.04e-11,72;CL:0000860,1.05e-11,42;CL:0002057,1.05e-11,42;CL:0002087,2.24e-11,115;CL:0000557,3.92e-10,67;CL:0000236,3.70e-09,14;CL:0000839,5.65e-09,66;CL:0002031,2.66e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-08;42!CL:0000049;3.58e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!3.85e-10!31;DOID:2531!4.67e-08!51;DOID:0060083!4.67e-08!51;DOID:1240!2.00e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.03e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.92e-10,31;DOID:2531,1.33e-08,51;DOID:0060083,1.33e-08,51;DOID:1240,5.95e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.39e-35!115;UBERON:0001049!1.08e-19!57;UBERON:0005068!1.08e-19!57;UBERON:0006241!1.08e-19!57;UBERON:0007135!1.08e-19!57;UBERON:0003080!1.08e-18!42;UBERON:0002780!1.20e-18!41;UBERON:0001890!1.20e-18!41;UBERON:0006240!1.20e-18!41;UBERON:0002616!1.23e-17!59;UBERON:0001017!2.15e-17!82;UBERON:0005743!3.24e-16!86;UBERON:0001893!4.02e-16!34;UBERON:0001869!8.03e-16!32;UBERON:0002791!1.73e-15!33;UBERON:0002020!2.28e-15!34;UBERON:0003528!2.28e-15!34;UBERON:0000955!3.38e-15!69;UBERON:0006238!3.38e-15!69;UBERON:0002619!4.67e-15!22;UBERON:0001950!2.31e-14!20;UBERON:0000956!4.60e-14!25;UBERON:0000203!4.60e-14!25;UBERON:0000073!6.95e-13!94;UBERON:0001016!6.95e-13!94;UBERON:0000479!1.10e-12!787;UBERON:0002193!1.79e-11!112;UBERON:0003075!4.00e-11!86;UBERON:0007284!4.00e-11!86;UBERON:0002390!2.10e-10!102;UBERON:0003061!2.10e-10!102;UBERON:0002346!2.43e-10!90;UBERON:0003056!2.83e-09!61;UBERON:0001474!5.29e-08!86;UBERON:0002371!8.09e-08!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.64e-15;22!UBERON:0001950;8.62e-15;20!UBERON:0001869;9.35e-15;32!UBERON:0000956;1.77e-14;25!UBERON:0000203;1.77e-14;25!UBERON:0001893;1.92e-14;34!UBERON:0002791;3.62e-14;32!UBERON:0002780;5.79e-14;41!UBERON:0001890;5.79e-14;41!UBERON:0003528;8.48e-14;34!UBERON:0002020;8.48e-14;34!UBERON:0000073;1.70e-11;53!UBERON:0002616;1.70e-11;53!UBERON:0007023;2.97e-09;114!UBERON:0000955;1.04e-07;68!UBERON:0001017;1.18e-07;75 | |||
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| ||
|short_description=p2@MEF2C | |||
}} | }} |
Latest revision as of 03:50, 19 September 2015
Short description: | p2@MEF2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEF2C_5end |
Coexpression cluster: | C1165_occipital_parietal_duodenum_temporal_brain_medial_frontal |
Association with transcript: | 0bp_to_ENST00000503075, ENST00000509349, ENST00000514015, ENST00000514028_5end |
EntrezGene: | MEF2C |
HGNC: | 6996 |
UniProt: | D6RG14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.21e-19 | 108 |
common myeloid progenitor | 1.21e-19 | 108 |
hematopoietic stem cell | 1.89e-19 | 168 |
hematopoietic oligopotent progenitor cell | 4.15e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.15e-18 | 161 |
hematopoietic cell | 4.23e-17 | 177 |
lymphocyte of B lineage | 4.80e-13 | 24 |
pro-B cell | 4.80e-13 | 24 |
macrophage dendritic cell progenitor | 1.18e-12 | 61 |
monopoietic cell | 1.31e-12 | 59 |
monocyte | 1.31e-12 | 59 |
monoblast | 1.31e-12 | 59 |
promonocyte | 1.31e-12 | 59 |
defensive cell | 2.74e-12 | 48 |
phagocyte | 2.74e-12 | 48 |
leukocyte | 6.62e-12 | 136 |
myeloid leukocyte | 1.04e-11 | 72 |
classical monocyte | 1.05e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-11 | 42 |
nongranular leukocyte | 2.24e-11 | 115 |
granulocyte monocyte progenitor cell | 3.92e-10 | 67 |
B cell | 3.70e-09 | 14 |
myeloid lineage restricted progenitor cell | 5.65e-09 | 66 |
hematopoietic lineage restricted progenitor cell | 2.66e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.92e-10 | 31 |
hematologic cancer | 1.33e-08 | 51 |
immune system cancer | 1.33e-08 | 51 |
leukemia | 5.95e-08 | 39 |