FFCP PHASE1:Hg19::chr5:82767383..82767423,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:82767383..82767423,+ to FFCP PHASE1:Hg19::chr5:82767383..82767423,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1462 | |EntrezGene=1462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2464 | |HGNC=2464 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000503923_5end | |||
|cluster_id=chr5:82767383..82767423,+ | |||
|coexpression_cluster_id=C4524 | |||
|description=CAGE_peak_3_at_VCAN_5end | |||
|id=chr5:82767383..82767423,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.14e-19!180;CL:0002057!1.68e-14!42;CL:0000860!7.65e-12!45;CL:0000393!3.98e-11!60;CL:0000211!3.98e-11!60;CL:0000057!3.98e-10!75;CL:0000680!2.27e-09!57;CL:0000056!2.27e-09!57;CL:0000355!2.27e-09!57;CL:0000187!2.31e-09!54;CL:0000183!6.86e-09!59;CL:0000034!3.11e-08!444;CL:0000048!3.71e-08!430;CL:0000723!2.40e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.33e-14;33!CL:0002057;5.33e-14;33!CL:0000473;1.46e-08;39!CL:0000234;1.46e-08;39!CL:0000576;3.79e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.53e-14,42;CL:0002057,2.53e-14,42;CL:0000393,3.12e-11,61;CL:0000211,3.12e-11,61;CL:0000473,1.72e-10,48;CL:0000234,1.72e-10,48;CL:0000057,1.98e-10,76;CL:0000034,1.44e-09,441;CL:0000048,1.48e-09,427;CL:0000680,1.89e-09,58;CL:0000056,1.89e-09,58;CL:0000355,1.89e-09,58;CL:0000187,1.96e-09,55;CL:0000723,1.18e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.71e-11;42 | |||
|ontology_enrichment_disease=DOID:2394!2.17e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.38e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!5.92e-19!659;UBERON:0000467!1.98e-14!625;UBERON:0000480!3.85e-14!626;UBERON:0000922!1.92e-13!612;UBERON:0002050!2.41e-11!605;UBERON:0005423!2.41e-11!605;UBERON:0002204!3.16e-11!167;UBERON:0000923!5.05e-11!604;UBERON:0005291!5.05e-11!604;UBERON:0006598!5.05e-11!604;UBERON:0002532!5.05e-11!604;UBERON:0000914!4.13e-09!83;UBERON:0002329!4.13e-09!83;UBERON:0003077!4.13e-09!83;UBERON:0003059!4.13e-09!83;UBERON:0007282!4.13e-09!83;UBERON:0009618!4.13e-09!83;UBERON:0007285!4.13e-09!83;UBERON:0000062!5.00e-09!511;UBERON:0001134!5.03e-09!61;UBERON:0002036!5.03e-09!61;UBERON:0003082!5.03e-09!61;UBERON:0002385!1.05e-08!63;UBERON:0001015!1.05e-08!63;UBERON:0000383!1.05e-08!63;UBERON:0004290!2.52e-08!70;UBERON:0000479!4.59e-08!787;UBERON:0000948!1.34e-07!24;UBERON:0005498!1.34e-07!24;UBERON:0004140!1.34e-07!24;UBERON:0009881!1.34e-07!24;UBERON:0004141!1.34e-07!24;UBERON:0003084!1.34e-07!24;UBERON:0007005!1.34e-07!24;UBERON:0004139!1.34e-07!24;UBERON:0004291!1.34e-07!24;UBERON:0000475!6.43e-07!365;UBERON:0001017!7.23e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.75e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.29e-12,592;UBERON:0000926,6.73e-12,315;UBERON:0004120,6.73e-12,315;UBERON:0006603,6.73e-12,315;UBERON:0002204,7.89e-12,167;UBERON:0005423,2.60e-10,581;UBERON:0001134,3.64e-09,62;UBERON:0002036,3.64e-09,62;UBERON:0003082,3.64e-09,62;UBERON:0010314,4.50e-09,132;UBERON:0002385,7.62e-09,64;UBERON:0001015,7.62e-09,64;UBERON:0000383,7.62e-09,64;UBERON:0007524,1.30e-08,73;UBERON:0000479,2.66e-08,773;UBERON:0003077,2.66e-08,72;UBERON:0007285,2.66e-08,72;UBERON:0002050,2.90e-08,564;UBERON:0002329,3.39e-08,71;UBERON:0003059,3.39e-08,71;UBERON:0007282,3.39e-08,71;UBERON:0004290,3.39e-08,71;UBERON:0009618,3.39e-08,71;UBERON:0000923,5.57e-08,560;UBERON:0010316,5.57e-08,560;UBERON:0005291,5.57e-08,560;UBERON:0006598,5.57e-08,560;UBERON:0010317,5.57e-08,560;UBERON:0002532,5.57e-08,560;UBERON:0000948,9.11e-08,24;UBERON:0005498,9.11e-08,24;UBERON:0004140,9.11e-08,24;UBERON:0009881,9.11e-08,24;UBERON:0004141,9.11e-08,24;UBERON:0003084,9.11e-08,24;UBERON:0007005,9.11e-08,24;UBERON:0004139,9.11e-08,24;UBERON:0004291,9.11e-08,24;UBERON:0007503,1.23e-07,78;UBERON:0007100,8.06e-07,27 | |||
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| ||
|short_description=p3@VCAN | |||
}} | }} |
Latest revision as of 00:38, 19 September 2015
Short description: | p3@VCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VCAN_5end |
Coexpression cluster: | C4524_Fibroblast_Smooth_Preadipocyte_Lens_CD14_mesenchymal_serous |
Association with transcript: | -13bp_to_ENST00000503923_5end |
EntrezGene: | VCAN |
HGNC: | 2464 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.53e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.53e-14 | 42 |
electrically responsive cell | 3.12e-11 | 61 |
electrically active cell | 3.12e-11 | 61 |
defensive cell | 1.72e-10 | 48 |
phagocyte | 1.72e-10 | 48 |
fibroblast | 1.98e-10 | 76 |
stem cell | 1.44e-09 | 441 |
multi fate stem cell | 1.48e-09 | 427 |
muscle precursor cell | 1.89e-09 | 58 |
myoblast | 1.89e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.89e-09 | 58 |
muscle cell | 1.96e-09 | 55 |
somatic stem cell | 1.18e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-07 | 14 |