FFCP PHASE1:Hg19::chr5:61874696..61874701,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100130733 | |EntrezGene=100130733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35155 | |HGNC=35155 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD14 | |UniProt=D6RD14 | ||
|association_with_transcript=0bp_to_ENST00000491184_5end | |||
|cluster_id=chr5:61874696..61874701,+ | |||
|description=CAGE_peak_3_at_LRRC70_5end | |||
|id=chr5:61874696..61874701,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.58e-40!24;CL:0000115!1.28e-29!35;CL:0005020!1.56e-24!6;CL:0002138!1.56e-24!6;CL:0005022!1.56e-24!6;CL:0002078!1.13e-22!44;CL:0000071!1.27e-20!18;CL:0002546!1.27e-20!18;CL:0000213!1.58e-16!57;CL:0000215!1.58e-16!57;CL:0002618!2.04e-12!3;CL:0002543!9.24e-11!6;CL:0002274!1.51e-07!5;CL:0000457!1.51e-07!5;CL:0002191!1.51e-07!5;CL:0000097!1.51e-07!5;CL:0000831!1.51e-07!5;CL:0002028!1.51e-07!5;CL:1000413!2.04e-07!9;CL:0002544!9.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000037;3.10e-50;1!CL:0001024;3.10e-50;1!CL:0002138;8.35e-34;6!CL:0002139;2.06e-19;24!CL:0002144;8.69e-18;3!CL:0000115;3.28e-11;36!CL:0002078;2.11e-10;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,3.99e-50,1;CL:0005020,9.87e-34,6;CL:0002138,9.87e-34,6;CL:0005022,9.87e-34,6;CL:0002139,2.00e-19,24;CL:0002144,6.76e-18,3;CL:0000115,2.78e-13,36;CL:0002078,8.21e-11,45;CL:0000213,1.39e-08,58;CL:0000215,1.39e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;8.35e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.27e-20!18;UBERON:0004638!1.27e-20!18;UBERON:0004852!1.27e-20!18;UBERON:0001473!3.16e-18!8;UBERON:0004536!3.16e-18!8;UBERON:0006558!3.16e-18!8;UBERON:0000487!1.71e-16!22;UBERON:0002465!1.94e-14!10;UBERON:0006914!2.90e-14!25;UBERON:0000055!2.84e-11!69;UBERON:0002049!2.25e-09!79;UBERON:0007798!2.25e-09!79;UBERON:0002066!1.29e-07!5;UBERON:0003915!2.04e-07!9;UBERON:0004700!2.04e-07!9;UBERON:0001917!2.04e-07!9;UBERON:0001638!3.52e-07!9;UBERON:0003920!3.52e-07!9;UBERON:0004582!3.52e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.11e-25;8!UBERON:0004536;1.11e-25;8!UBERON:0006558;1.11e-25;8!UBERON:0002465;8.54e-21;10!UBERON:0010523;8.69e-18;3!UBERON:0001915;8.69e-18;3!UBERON:0001982;8.69e-18;3!UBERON:0002405;2.27e-17;27!UBERON:0002193;4.13e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.26e-25,8;UBERON:0004536,1.26e-25,8;UBERON:0006558,1.26e-25,8;UBERON:0002465,9.44e-21,10;UBERON:0010523,6.76e-18,3;UBERON:0001915,6.76e-18,3;UBERON:0001982,6.76e-18,3;UBERON:0000055,1.92e-07,68 | |||
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| ||
|short_description=p3@LRRC70 | |||
}} | }} |
Latest revision as of 09:29, 18 September 2015
Short description: | p3@LRRC70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC70_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000491184_5end |
EntrezGene: | LRRC70 |
HGNC: | 35155 |
UniProt: | D6RD14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 3.99e-50 | 1 |
lymphangioblast | 9.87e-34 | 6 |
endothelial cell of lymphatic vessel | 9.87e-34 | 6 |
vascular lymphangioblast | 9.87e-34 | 6 |
endothelial cell of vascular tree | 2.00e-19 | 24 |
capillary endothelial cell | 6.76e-18 | 3 |
endothelial cell | 2.78e-13 | 36 |
meso-epithelial cell | 8.21e-11 | 45 |
lining cell | 1.39e-08 | 58 |
barrier cell | 1.39e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.26e-25 | 8 |
lymph vasculature | 1.26e-25 | 8 |
lymphatic part of lymphoid system | 1.26e-25 | 8 |
lymphoid system | 9.44e-21 | 10 |
microcirculatory vessel | 6.76e-18 | 3 |
endothelium of capillary | 6.76e-18 | 3 |
capillary | 6.76e-18 | 3 |
vessel | 1.92e-07 | 68 |