FFCP PHASE1:Hg19::chr5:38556728..38556771,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:38556728..38556771,- to FFCP PHASE1:Hg19::chr5:38556728..38556771,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3977 | |EntrezGene=3977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6597 | |HGNC=6597 | ||
|TSSclassifier=strong | |||
|UniProt=P42702,D6RF33,A8K1Z4 | |UniProt=P42702,D6RF33,A8K1Z4 | ||
|association_with_transcript=0bp_to_ENST00000453190,ENST00000506990,NM_001127671,uc010ive.1_5end | |||
|cluster_id=chr5:38556728..38556771,- | |||
|description=CAGE_peak_1_at_LIFR_5end | |||
|id=chr5:38556728..38556771,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.85e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.23e-37!115;UBERON:0000477!1.22e-33!286;UBERON:0001017!3.99e-32!82;UBERON:0000481!5.03e-32!347;UBERON:0000073!1.62e-31!94;UBERON:0001016!1.62e-31!94;UBERON:0005743!3.39e-31!86;UBERON:0000955!3.34e-28!69;UBERON:0006238!3.34e-28!69;UBERON:0000475!3.71e-28!365;UBERON:0001049!1.54e-27!57;UBERON:0005068!1.54e-27!57;UBERON:0006241!1.54e-27!57;UBERON:0007135!1.54e-27!57;UBERON:0002616!2.12e-27!59;UBERON:0002346!5.06e-27!90;UBERON:0004111!1.93e-26!241;UBERON:0003075!3.14e-26!86;UBERON:0007284!3.14e-26!86;UBERON:0000468!9.61e-26!659;UBERON:0000119!3.07e-24!312;UBERON:0000483!1.50e-23!309;UBERON:0000153!4.55e-23!129;UBERON:0007811!4.55e-23!129;UBERON:0000033!5.10e-23!123;UBERON:0000924!2.56e-22!173;UBERON:0006601!2.56e-22!173;UBERON:0000025!6.33e-22!194;UBERON:0004121!1.88e-21!169;UBERON:0003080!9.37e-21!42;UBERON:0000467!2.63e-20!625;UBERON:0002780!4.18e-20!41;UBERON:0001890!4.18e-20!41;UBERON:0006240!4.18e-20!41;UBERON:0000480!6.00e-20!626;UBERON:0000922!8.50e-20!612;UBERON:0002050!2.12e-18!605;UBERON:0005423!2.12e-18!605;UBERON:0000923!5.04e-18!604;UBERON:0005291!5.04e-18!604;UBERON:0006598!5.04e-18!604;UBERON:0002532!5.04e-18!604;UBERON:0002020!2.58e-17!34;UBERON:0003528!2.58e-17!34;UBERON:0001893!2.73e-17!34;UBERON:0003056!3.03e-17!61;UBERON:0002791!9.04e-17!33;UBERON:0000062!1.06e-16!511;UBERON:0000064!3.66e-16!219;UBERON:0001869!5.58e-16!32;UBERON:0000956!5.48e-12!25;UBERON:0000203!5.48e-12!25;UBERON:0002619!2.19e-11!22;UBERON:0001950!2.40e-10!20;UBERON:0003104!4.83e-10!238;UBERON:0009142!4.83e-10!238;UBERON:0001007!6.35e-10!155;UBERON:0001555!6.35e-10!155;UBERON:0007026!6.35e-10!155;UBERON:0004921!1.30e-09!129;UBERON:0004185!1.30e-09!129;UBERON:0001048!7.64e-09!168;UBERON:0004119!3.24e-08!169;UBERON:0000925!3.24e-08!169;UBERON:0006595!3.24e-08!169;UBERON:0003076!6.25e-08!15;UBERON:0003057!6.25e-08!15;UBERON:0002100!8.02e-08!216;UBERON:0005177!2.56e-07!107;UBERON:0000077!2.66e-07!130;UBERON:0002308!6.15e-07!9;UBERON:0000125!6.15e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.22e-15;34!UBERON:0002020;6.22e-15;34!UBERON:0001893;6.26e-15;34!UBERON:0002780;6.58e-15;41!UBERON:0001890;6.58e-15;41!UBERON:0002791;8.46e-15;32!UBERON:0001869;1.19e-14;32!UBERON:0000073;1.90e-14;53!UBERON:0002616;1.90e-14;53!UBERON:0001017;7.09e-13;75!UBERON:0000955;1.56e-12;68!UBERON:0000956;4.59e-12;25!UBERON:0000203;4.59e-12;25!UBERON:0001016;1.08e-11;83!UBERON:0002619;1.84e-11;22!UBERON:0007023;4.16e-11;114!UBERON:0001950;2.05e-10;20!UBERON:0011216;7.41e-08;132!UBERON:0000125;5.50e-07;9!UBERON:0002308;5.50e-07;9 | |||
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| ||
|short_description=p1@LIFR | |||
}} | }} |
Latest revision as of 20:20, 17 September 2015
Short description: | p1@LIFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LIFR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000453190, ENST00000506990, NM_001127671, uc010ive.1_5end |
EntrezGene: | LIFR |
HGNC: | 6597 |
UniProt: | P42702D6RF33A8K1Z4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data