FFCP PHASE1:Hg19::chr5:35991404..35991414,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:35991404..35991414,- to FFCP PHASE1:Hg19::chr5:35991404..35991414,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=133688 | |EntrezGene=133688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26625 | |HGNC=26625 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000513233_5end | |||
|cluster_id=chr5:35991404..35991414,- | |||
|coexpression_cluster_id=C1009 | |||
|description=CAGE_peak_4_at_UGT3A1_5end | |||
|id=chr5:35991404..35991414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.39e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.91e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.10e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002426!2.89e-08!1;UBERON:0003831!2.89e-08!1;UBERON:0003898!2.89e-08!1;UBERON:0004830!2.89e-08!1;UBERON:0001774!2.89e-08!1;UBERON:0003830!2.89e-08!1;UBERON:0005175!2.89e-08!1;UBERON:0003897!2.89e-08!1;UBERON:0001103!2.89e-08!1;UBERON:0010084!2.89e-08!1;UBERON:0007029!6.52e-08!1;UBERON:0001301!1.44e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.98e-14;1!UBERON:0003831;3.98e-14;1!UBERON:0003898;3.98e-14;1!UBERON:0004830;3.98e-14;1!UBERON:0003830;3.98e-14;1!UBERON:0005175;3.98e-14;1!UBERON:0001774;3.98e-14;1!UBERON:0001103;3.98e-14;1!UBERON:0007029;1.61e-13;1!UBERON:0002107;6.89e-11;19!UBERON:0006925;6.89e-11;19!UBERON:0002108;1.06e-10;4!UBERON:0002423;2.52e-08;25!UBERON:0005090;1.05e-07;2!UBERON:0001630;1.05e-07;2!UBERON:0000341;1.50e-07;2!UBERON:0002365;5.75e-07;31!UBERON:0002330;5.75e-07;31!UBERON:0005172;9.17e-07;52!UBERON:0005173;9.17e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.50e-14,1;UBERON:0003831,3.50e-14,1;UBERON:0003898,3.50e-14,1;UBERON:0004830,3.50e-14,1;UBERON:0003830,3.50e-14,1;UBERON:0005175,3.50e-14,1;UBERON:0001774,3.50e-14,1;UBERON:0001103,3.50e-14,1;UBERON:0010084,3.50e-14,1;UBERON:0007029,1.61e-13,1;UBERON:0002107,6.37e-11,19;UBERON:0006925,6.37e-11,19;UBERON:0008836,6.37e-11,19;UBERON:0002108,1.23e-10,4;UBERON:0008835,1.84e-09,22;UBERON:0003894,1.84e-09,22;UBERON:0009854,4.64e-09,23;UBERON:0007499,2.38e-08,25;UBERON:0009497,2.38e-08,25;UBERON:0000015,2.38e-08,25;UBERON:0002423,2.38e-08,25;UBERON:0006235,2.38e-08,25;UBERON:0004161,2.38e-08,25;UBERON:0005172,4.54e-08,54;UBERON:0005173,4.54e-08,54;UBERON:0009856,4.90e-08,26;UBERON:0005090,9.87e-08,2;UBERON:0001630,9.87e-08,2;UBERON:0000341,1.36e-07,2;UBERON:0002417,3.18e-07,60;UBERON:0000916,3.18e-07,60;UBERON:0002365,9.11e-07,31;UBERON:0002330,9.11e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,4.2555081941567,2.15063811353492,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27588041241097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0.0714765441766563,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.45713297917742,0,0,0,0,0.329821550236287,0,1.08043821351123,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,2.61870874610114,0.0645889098360061,0,0,0,0,0,1.71116650542641,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,4.2555081941567,2.15063811353492,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27588041241097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0.0714765441766563,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.45713297917742,0,0,0,0,0.329821550236287,0,1.08043821351123,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,2.61870874610114,0.0645889098360061,0,0,0,0,0,1.71116650542641,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@UGT3A1 | |||
}} | }} |
Latest revision as of 18:50, 17 September 2015
Short description: | p4@UGT3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UGT3A1_5end |
Coexpression cluster: | C1009_kidney_liver_renal_Hepatocyte_small_temporal_pineal |
Association with transcript: | 21bp_to_ENST00000513233_5end |
EntrezGene: | UGT3A1 |
HGNC: | 26625 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.91e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.50e-14 | 1 |
respiratory system muscle | 3.50e-14 | 1 |
skeletal muscle of trunk | 3.50e-14 | 1 |
respiratory system skeletal muscle | 3.50e-14 | 1 |
thoracic segment muscle | 3.50e-14 | 1 |
chest organ | 3.50e-14 | 1 |
muscle of trunk | 3.50e-14 | 1 |
diaphragm | 3.50e-14 | 1 |
future diaphragm | 3.50e-14 | 1 |
surface | 1.61e-13 | 1 |
liver | 6.37e-11 | 19 |
digestive gland | 6.37e-11 | 19 |
liver bud | 6.37e-11 | 19 |
small intestine | 1.23e-10 | 4 |
hepatic diverticulum | 1.84e-09 | 22 |
liver primordium | 1.84e-09 | 22 |
digestive tract diverticulum | 4.64e-09 | 23 |
epithelial sac | 2.38e-08 | 25 |
epithelium of foregut-midgut junction | 2.38e-08 | 25 |
anatomical boundary | 2.38e-08 | 25 |
hepatobiliary system | 2.38e-08 | 25 |
foregut-midgut junction | 2.38e-08 | 25 |
septum transversum | 2.38e-08 | 25 |
abdomen element | 4.54e-08 | 54 |
abdominal segment element | 4.54e-08 | 54 |
sac | 4.90e-08 | 26 |
muscle structure | 9.87e-08 | 2 |
muscle organ | 9.87e-08 | 2 |
throat | 1.36e-07 | 2 |
abdominal segment of trunk | 3.18e-07 | 60 |
abdomen | 3.18e-07 | 60 |
exocrine gland | 9.11e-07 | 31 |
exocrine system | 9.11e-07 | 31 |