FFCP PHASE1:Hg19::chr5:176929637..176929664,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:176929637..176929664,- to FFCP PHASE1:Hg19::chr5:176929637..176929664,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79930 | |EntrezGene=79930 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24583 | |HGNC=24583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=390bp_to_AL833678_5end | |||
|cluster_id=chr5:176929637..176929664,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_DOK3_5end | |||
|id=chr5:176929637..176929664,- | |||
|ontology_enrichment_celltype=CL:0000037!1.06e-44!172;CL:0000566!1.06e-44!172;CL:0000766!1.44e-44!76;CL:0000763!6.39e-44!112;CL:0000049!6.39e-44!112;CL:0002032!8.44e-43!165;CL:0000837!8.44e-43!165;CL:0000988!2.64e-40!182;CL:0000738!4.87e-38!140;CL:0000839!1.81e-36!70;CL:0002194!5.32e-36!63;CL:0000576!5.32e-36!63;CL:0000040!5.32e-36!63;CL:0000559!5.32e-36!63;CL:0000557!1.14e-35!71;CL:0002057!1.79e-34!42;CL:0002009!2.61e-34!65;CL:0000860!2.67e-34!45;CL:0002087!5.40e-34!119;CL:0002031!4.67e-31!124;CL:0000134!3.51e-10!358;CL:0002320!1.94e-09!365;CL:0000945!3.30e-09!24;CL:0000826!3.30e-09!24;CL:0000219!3.62e-08!390;CL:0000094!1.41e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-41;33!CL:0002057;2.25e-41;33!CL:0000473;1.70e-40;39!CL:0000234;1.70e-40;39!CL:0000576;1.07e-21;48!CL:0000766;9.50e-20;69!CL:0000763;3.37e-17;100!CL:0000775;2.44e-13;3!CL:0000094;1.29e-12;8!CL:0000738;1.90e-10;136!CL:0002087;1.28e-09;104!CL:0000081;4.53e-09;11!CL:0000771;8.61e-09;2!CL:0000988;4.71e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.44e-44,108;CL:0000049,1.44e-44,108;CL:0000473,2.43e-44,48;CL:0000234,2.43e-44,48;CL:0000766,7.59e-44,72;CL:0002032,7.46e-40,161;CL:0000837,7.46e-40,161;CL:0000037,9.92e-40,168;CL:0000860,2.87e-39,42;CL:0002057,2.87e-39,42;CL:0000988,3.31e-37,177;CL:0002194,3.74e-37,59;CL:0000576,3.74e-37,59;CL:0000040,3.74e-37,59;CL:0000559,3.74e-37,59;CL:0002009,9.75e-36,61;CL:0000738,1.28e-33,136;CL:0000839,1.43e-32,66;CL:0000557,5.42e-32,67;CL:0002087,1.02e-29,115;CL:0002031,1.64e-24,120;CL:0000134,1.54e-13,354;CL:0000775,2.46e-13,3;CL:0002320,4.45e-13,361;CL:0000094,1.40e-12,8;CL:0000219,1.87e-11,386;CL:0000048,1.80e-09,427;CL:0000723,3.37e-09,433;CL:0000081,4.79e-09,11;CL:0000034,7.60e-09,441;CL:0000771,9.70e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.56e-30;42!CL:0000049;4.01e-16;108 | |||
|ontology_enrichment_disease=DOID:2531!1.07e-11!51;DOID:0060083!1.07e-11!51;DOID:8692!1.33e-08!31;DOID:1240!2.42e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.12e-07;31!DOID:1240;3.89e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.63e-09,51;DOID:0060083,4.63e-09,51;DOID:1240,6.18e-09,39;DOID:8692,8.59e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.22e-38!102;UBERON:0003061!4.22e-38!102;UBERON:0002193!3.61e-35!112;UBERON:0002371!1.99e-32!80;UBERON:0001474!9.13e-30!86;UBERON:0004765!2.36e-22!101;UBERON:0001434!2.36e-22!101;UBERON:0002405!5.17e-22!115;UBERON:0003081!8.04e-09!216;UBERON:0002384!8.58e-09!375;UBERON:0002204!2.10e-08!167;UBERON:0000178!8.89e-07!15;UBERON:0000179!8.89e-07!15;UBERON:0000463!8.89e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.17e-11;15!UBERON:0000179;3.17e-11;15!UBERON:0000463;3.17e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-36,98;UBERON:0003061,1.16e-36,98;UBERON:0002193,1.00e-34,108;UBERON:0002371,8.17e-30,76;UBERON:0001474,3.68e-27,82;UBERON:0002405,3.80e-25,93;UBERON:0004765,3.60e-24,90;UBERON:0001434,4.21e-21,100;UBERON:0003081,1.51e-13,203;UBERON:0002384,1.89e-12,371;UBERON:0000178,2.30e-11,15;UBERON:0000179,2.30e-11,15;UBERON:0000463,2.30e-11,15;UBERON:0002204,4.55e-10,167 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.821005894499457,0.629686250509434,0.786728553697808,0,0.154816123316076,0,0,0,1.31694240986513,0.995184627411951,0.587200878669695,0,1.60435557976113,0.434021741431704,0,0,0.257575567634187,3.63495596948912,2.26725566213286,0.485168122375632,3.71886459049095,2.05583944010913,0.929119112685311,2.3015391385772,0.768482119587302,0.236482229888585,2.41321976515633,1.29096936716765,5.41705946377367,4.70605848856512,2.45615535052061,1.34834090667051,5.20342617030534,4.49300637906531,2.55734850319616,1.9791078011203,1.59570926097305,1.27867425159808,3.19230162491442,0,0.622822248995575,2.76373531782418,2.60741459210101,1.52032191293582,0.605399502633369,0.736555271975129,0.632924774881769,0.422510572623884,0.425208599930087,0,0.786300418025466,0.150176892841506,0.48217676009124,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.522389211897802,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,2.22946743433092,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,6.32501818449095,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,21.7212036944683,41.8826042885635,16.5766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.74709290462411,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,2.84823593587081,1.66762242820452,1.23408681925858,1.94541993357815,2.70015718619057,1.58625035258854,0.106824071127473,0,0,1.30062222588003,1.73123055571734,0.0711418433484141,0,0.199579371432817,0,0,0.649243880549111,0.842391534340376,1.59764275323235,1.72347885350326,0,0,0.321176150207399,1.21079824314629,1.70338495076131,0,1.53620382154229,0.447352215784832,0.166849141711909,0.781552381608161,0,0,1.08182271390393,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0.329607748453519,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0.179021174675609,1.02314474045374,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0,0.21787692703798,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0.533034776018635,0,0.156980256395025,1.16348177330109,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.514784993585894,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0.828478110694391,1.48849806543585,0.197611631897944,0.60896299190448,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.426766918776564,1.37771983728653,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,1.26757386311357,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.845855261818682,0.386747327841463,0.0999411559249289,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.471464371102113,0.215166616178029,0,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233 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568492303233 | ||
|short_description=p5@DOK3 | |||
}} | }} |
Latest revision as of 07:04, 17 September 2015
Short description: | p5@DOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DOK3_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 390bp_to_AL833678_5end |
EntrezGene: | DOK3 |
HGNC: | 24583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.44e-44 | 108 |
common myeloid progenitor | 1.44e-44 | 108 |
defensive cell | 2.43e-44 | 48 |
phagocyte | 2.43e-44 | 48 |
myeloid leukocyte | 7.59e-44 | 72 |
hematopoietic oligopotent progenitor cell | 7.46e-40 | 161 |
hematopoietic multipotent progenitor cell | 7.46e-40 | 161 |
hematopoietic stem cell | 9.92e-40 | 168 |
classical monocyte | 2.87e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-39 | 42 |
hematopoietic cell | 3.31e-37 | 177 |
monopoietic cell | 3.74e-37 | 59 |
monocyte | 3.74e-37 | 59 |
monoblast | 3.74e-37 | 59 |
promonocyte | 3.74e-37 | 59 |
macrophage dendritic cell progenitor | 9.75e-36 | 61 |
leukocyte | 1.28e-33 | 136 |
myeloid lineage restricted progenitor cell | 1.43e-32 | 66 |
granulocyte monocyte progenitor cell | 5.42e-32 | 67 |
nongranular leukocyte | 1.02e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 1.64e-24 | 120 |
mesenchymal cell | 1.54e-13 | 354 |
neutrophil | 2.46e-13 | 3 |
connective tissue cell | 4.45e-13 | 361 |
granulocyte | 1.40e-12 | 8 |
motile cell | 1.87e-11 | 386 |
multi fate stem cell | 1.80e-09 | 427 |
somatic stem cell | 3.37e-09 | 433 |
blood cell | 4.79e-09 | 11 |
stem cell | 7.60e-09 | 441 |
eosinophil | 9.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.16e-36 | 98 |
blood island | 1.16e-36 | 98 |
hemolymphoid system | 1.00e-34 | 108 |
bone marrow | 8.17e-30 | 76 |
bone element | 3.68e-27 | 82 |
immune system | 3.80e-25 | 93 |
skeletal element | 3.60e-24 | 90 |
skeletal system | 4.21e-21 | 100 |
lateral plate mesoderm | 1.51e-13 | 203 |
connective tissue | 1.89e-12 | 371 |
blood | 2.30e-11 | 15 |
haemolymphatic fluid | 2.30e-11 | 15 |
organism substance | 2.30e-11 | 15 |
musculoskeletal system | 4.55e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.63e-09 | 51 |
immune system cancer | 4.63e-09 | 51 |
leukemia | 6.18e-09 | 39 |
myeloid leukemia | 8.59e-08 | 31 |