FFCP PHASE1:Hg19::chr5:175085039..175085106,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:175085039..175085106,+ to FFCP PHASE1:Hg19::chr5:175085039..175085106,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3274 | |EntrezGene=3274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5183 | |HGNC=5183 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5R9 | |UniProt=Q7Z5R9 | ||
|association_with_transcript=0bp_to_NM_001131055,uc003mdc.3_5end | |||
|cluster_id=chr5:175085039..175085106,+ | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_1_at_HRH2_5end | |||
|id=chr5:175085039..175085106,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.16e-32!76;CL:0000763!2.06e-30!112;CL:0000049!2.06e-30!112;CL:0002194!3.56e-29!63;CL:0000576!3.56e-29!63;CL:0000040!3.56e-29!63;CL:0000559!3.56e-29!63;CL:0002009!5.58e-28!65;CL:0000839!1.42e-26!70;CL:0000557!2.82e-26!71;CL:0000037!3.13e-26!172;CL:0000566!3.13e-26!172;CL:0002057!6.43e-26!42;CL:0000738!1.01e-23!140;CL:0002032!2.14e-23!165;CL:0000837!2.14e-23!165;CL:0000988!4.45e-23!182;CL:0000860!1.32e-22!45;CL:0002087!4.62e-20!119;CL:0002031!1.36e-17!124;CL:0002393!6.43e-08!9;CL:0002397!6.43e-08!9;CL:0000094!2.81e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.15e-22;48!CL:0000860;9.31e-21;33!CL:0002057;9.31e-21;33!CL:0000473;1.02e-19;39!CL:0000234;1.02e-19;39!CL:0000766;1.49e-16;69!CL:0000763;6.35e-11;100!CL:0000094;2.63e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.16e-39,72;CL:0002194,2.44e-37,59;CL:0000576,2.44e-37,59;CL:0000040,2.44e-37,59;CL:0000559,2.44e-37,59;CL:0002009,2.94e-35,61;CL:0000763,5.71e-33,108;CL:0000049,5.71e-33,108;CL:0000473,9.87e-33,48;CL:0000234,9.87e-33,48;CL:0000557,2.17e-31,67;CL:0000839,1.22e-30,66;CL:0000860,3.39e-30,42;CL:0002057,3.39e-30,42;CL:0000037,7.38e-26,168;CL:0000738,6.41e-24,136;CL:0000988,3.98e-23,177;CL:0002032,9.82e-23,161;CL:0000837,9.82e-23,161;CL:0002087,4.57e-22,115;CL:0002031,4.18e-17,120;CL:0002393,4.94e-09,9;CL:0002397,4.94e-09,9;CL:0000094,2.78e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.69e-22;42!CL:0000049;6.62e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.22e-38!115;UBERON:0002390!2.77e-30!102;UBERON:0003061!2.77e-30!102;UBERON:0002193!5.25e-26!112;UBERON:0002371!1.32e-23!80;UBERON:0001474!2.76e-21!86;UBERON:0003080!6.86e-17!42;UBERON:0002780!1.03e-16!41;UBERON:0001890!1.03e-16!41;UBERON:0006240!1.03e-16!41;UBERON:0001049!1.96e-16!57;UBERON:0005068!1.96e-16!57;UBERON:0006241!1.96e-16!57;UBERON:0007135!1.96e-16!57;UBERON:0004765!6.33e-16!101;UBERON:0001434!6.33e-16!101;UBERON:0001893!2.30e-15!34;UBERON:0002020!2.39e-15!34;UBERON:0003528!2.39e-15!34;UBERON:0001869!5.98e-15!32;UBERON:0002791!6.29e-15!33;UBERON:0002405!9.56e-15!115;UBERON:0002616!2.13e-14!59;UBERON:0001017!4.10e-14!82;UBERON:0005743!6.32e-13!86;UBERON:0000955!2.17e-12!69;UBERON:0006238!2.17e-12!69;UBERON:0002619!5.68e-12!22;UBERON:0000956!2.70e-11!25;UBERON:0000203!2.70e-11!25;UBERON:0001950!2.78e-11!20;UBERON:0000073!6.63e-11!94;UBERON:0001016!6.63e-11!94;UBERON:0003075!2.07e-08!86;UBERON:0007284!2.07e-08!86;UBERON:0002346!2.57e-08!90;UBERON:0003056!1.91e-07!61;UBERON:0000178!7.53e-07!15;UBERON:0000179!7.53e-07!15;UBERON:0000463!7.53e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.97e-14;32!UBERON:0002619;7.38e-14;22!UBERON:0002791;1.04e-13;32!UBERON:0001893;1.05e-13;34!UBERON:0003528;1.37e-13;34!UBERON:0002020;1.37e-13;34!UBERON:0001950;4.95e-13;20!UBERON:0002780;5.81e-12;41!UBERON:0001890;5.81e-12;41!UBERON:0000956;3.19e-11;25!UBERON:0000203;3.19e-11;25!UBERON:0007023;1.05e-09;114!UBERON:0000073;1.23e-08;53!UBERON:0002616;1.23e-08;53!UBERON:0000178;2.86e-08;15!UBERON:0000179;2.86e-08;15!UBERON:0000463;2.86e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-38,114;UBERON:0002390,2.92e-35,98;UBERON:0003061,2.92e-35,98;UBERON:0002193,3.81e-31,108;UBERON:0002371,1.01e-26,76;UBERON:0002405,4.85e-24,93;UBERON:0001474,6.94e-24,82;UBERON:0004765,1.44e-19,90;UBERON:0001434,4.10e-17,100;UBERON:0002780,3.05e-16,41;UBERON:0001890,3.05e-16,41;UBERON:0003080,3.05e-16,41;UBERON:0006240,3.05e-16,41;UBERON:0001049,3.79e-16,56;UBERON:0005068,3.79e-16,56;UBERON:0006241,3.79e-16,56;UBERON:0007135,3.79e-16,56;UBERON:0001893,7.09e-16,34;UBERON:0003528,7.41e-16,34;UBERON:0002020,7.41e-16,34;UBERON:0001869,2.30e-15,32;UBERON:0002791,3.45e-15,32;UBERON:0000073,5.25e-15,53;UBERON:0002616,5.25e-15,53;UBERON:0002619,8.59e-14,22;UBERON:0001950,5.55e-13,20;UBERON:0001017,4.43e-12,81;UBERON:0000956,3.62e-11,25;UBERON:0000203,3.62e-11,25;UBERON:0003081,2.29e-10,203;UBERON:0000955,2.43e-10,68;UBERON:0006238,2.43e-10,68;UBERON:0001016,9.55e-10,89;UBERON:0003075,6.03e-09,82;UBERON:0007284,6.03e-09,82;UBERON:0002346,2.48e-08,86;UBERON:0000178,2.92e-08,15;UBERON:0000179,2.92e-08,15;UBERON:0000463,2.92e-08,15;UBERON:0003056,6.07e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.376627918784408,0,0,0,49.5638988829619,7.29275856384704,25.5446603471525,0,0,0,0,0,4.9912074686924,24.9297933839345,25.469144828708,31.4665762537985,24.8546176406316,13.2796403067782,25.7575567634187,10.3232749533491,15.87078963493,24.2584061187816,8.13501629169896,10.2791972005456,15.1756121738601,8.91846416198666,23.3106242941482,15.1348627128695,11.721353145045,29.0468107612722,14.8969135253776,8.47090527941721,10.3704337021981,8.31476892446813,7.03992952453076,12.8371610830437,12.1474053901818,13.8537546078421,18.1511928435685,24.2948107803636,4.06292934080018,10.2129340444405,4.9825779919646,8.54245461872927,22.9452484104889,18.0266741105247,7.87019353423379,13.9945501675275,9.81033401066742,26.6181660753047,25.9377245957353,20.7562059053292,33.4739320816555,29.7350247826183,43.3959084082116,22.5160067555586,33.2190850922481,26.6689664496366,0,0.546138611262131,0,0,0,0,0.661044872784862,1.90810750907073,0,0.587237189370939,0.382273228125229,0,0.560508562981536,5.79444986505169,4.91774425284583,2.75107533924415,3.70082698199117,7.02183280640848,4.88883399950386,4.2610302516126,7.79306913631645,1.89397776704795,0.883817722424512,1.32920336750173,4.60366568400527,9.09448370052294,6.37290803043403,7.72858151637278,9.39590060471884,5.21645554323094,8.89719378972362,5.08327573370455,11.4989076185474,1.58633079776593,1.53288197440768,0.68725489096526,3.03623630423403,2.22995790026868,2.60433381542567,1.90090408889675,7.98048131112196,7.16725022464743,7.49584359314075,5.44587679701239,2.46338399076314,0.80642697289893,0.534880391567015,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0.175669571386252,3.6019245761871,0,0,9.08732702233113,8.88061660226263,12.8969221703299,7.63169997777094,5.14795419702115,2.60020250930695,0.39752481473341,0,1.73570250803797,2.26123176769604,1.25849830862972,0,1.46296476575767,0,0,0,0,0,0,1.10298924103761,0,0,0,0,0,0,0,34.2629085333764,58.1670396222488,0,0,0.12663051166458,0,0.573673241497627,0,1.12135520028461,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0.125118519871964,0,1.31693286264251,0,1.05166641234618,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,1.63647672354501,0,1.09776335516636,1.72288698817931,1.62671520017326,0.725627385107593,1.51392510525377,1.09493207722749,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,3.09024169590255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,8.61759521305891,2.10603838625314,12.4850176322532,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.576479813667846,0,4.38135470615966,23.6832823846132,18.7547915536075,6.84289784090821,6.27247705490273,18.6212695863229,2.5724378936752,3.25180144601546,0.87192013766656,1.6134422880609,0,0,0,0,0,0.257207374262142,2.83698264046557,0.532844358032199,0,0,0,0,0,0,0,0,0,2.43247561282381,8.03611346291402,8.43335757932127,0,0,0,0,0,0,0,1.97030760201927,0.862510299438069,1.79680250791648,0.76228387266739,0,0,1.17261385734044,1.27587750330633,85.3868007299788,68.8071356169257,134.270626353275,0,0,0,0,0,0.157702415033935,0,0.300946099727719,4.5481500811197,0,0,0.368738337083406,0,0.979005787313703,1.71571711905428,19.8497305077972,24.1599904916851,14.5149478612684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,2.15623506123262,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0.43050537267123,0,0.886860307073351,0.459446800413919,43.1330467847344,49.7014184642544,59.2433074661129,33.828912115006,25.504460931344,69.3866442976207,45.3626407280016,45.2081350487734,0,1.92495971052672,0.245040215981032,0,0.28853842595289,0.0711418433484141,0,0,4.21311814291207,0.211673582723883,6.16781686521655,5.89674074038263,8.9011524822945,12.2210318702958,25.0634477090067,0,23.1246828149327,33.7005511009049,27.2541592121809,23.7018687881478,10.753426750796,15.6573275524691,13.6816296203765,22.6650190666367,0,0,0,9.32601510393896,0,0,5.86032717087576,0,0,0,0.23874448473769,0.593929361665277,0,7.95318118213038,8.15882615180974,0,0,2.95575571379191,1.9924798825107,3.31540698637377,0,0,0,0,0,0.358042349351218,28.6480527327048,2.86065876347107,14.3689855408164,0,7.75466196876175,11.3177079757459,3.99227596002388,0,0,2.17499872630438,0,0,0.472775363535873,0,0,0.520874984799877,16.8290863304629,17.0040978461825,0,1.10579259931225,0.295547618953547,8.33664509185096,0,0,2.00070672109872,1.13942055847001,0,0,0,0.638002319463839,0.183195186803725,2.13213910407454,1.02193298195737,2.35470384592537,0.831058409500782,0,0,0,0,0,0,0,0,0,1.99052386215701,4.0690479671536,1.83309043480088,0,0,0,2.0220339894203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| ||
|short_description=p1@HRH2 | |||
}} | }} |
Latest revision as of 03:25, 17 September 2015
Short description: | p1@HRH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HRH2_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_NM_001131055, uc003mdc.3_5end |
EntrezGene: | HRH2 |
HGNC: | 5183 |
UniProt: | Q7Z5R9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.16e-39 | 72 |
monopoietic cell | 2.44e-37 | 59 |
monocyte | 2.44e-37 | 59 |
monoblast | 2.44e-37 | 59 |
promonocyte | 2.44e-37 | 59 |
macrophage dendritic cell progenitor | 2.94e-35 | 61 |
myeloid cell | 5.71e-33 | 108 |
common myeloid progenitor | 5.71e-33 | 108 |
defensive cell | 9.87e-33 | 48 |
phagocyte | 9.87e-33 | 48 |
granulocyte monocyte progenitor cell | 2.17e-31 | 67 |
myeloid lineage restricted progenitor cell | 1.22e-30 | 66 |
classical monocyte | 3.39e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.39e-30 | 42 |
hematopoietic stem cell | 7.38e-26 | 168 |
leukocyte | 6.41e-24 | 136 |
hematopoietic cell | 3.98e-23 | 177 |
hematopoietic oligopotent progenitor cell | 9.82e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.82e-23 | 161 |
nongranular leukocyte | 4.57e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 4.18e-17 | 120 |
intermediate monocyte | 4.94e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.94e-09 | 9 |
granulocyte | 2.78e-08 | 8 |