FFCP PHASE1:Hg19::chr5:169816353..169816389,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:169816353..169816389,- to FFCP PHASE1:Hg19::chr5:169816353..169816389,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3779 | |EntrezGene=3779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6285 | |HGNC=6285 | ||
|TSSclassifier=strong | |||
|UniProt=Q16558 | |UniProt=Q16558 | ||
|association_with_transcript=248bp_to_ENST00000521859,NM_004137,uc003maq.1,uc003mar.2_5end | |||
|cluster_id=chr5:169816353..169816389,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_KCNMB1_5end | |||
|id=chr5:169816353..169816389,- | |||
|ontology_enrichment_celltype=CL:0002009!6.75e-17!65;CL:0002194!7.92e-16!63;CL:0000576!7.92e-16!63;CL:0000040!7.92e-16!63;CL:0000559!7.92e-16!63;CL:0000557!6.11e-15!71;CL:0002057!1.02e-13!42;CL:0000839!1.52e-13!70;CL:0000766!3.33e-12!76;CL:0000860!4.00e-12!45;CL:0000763!2.67e-10!112;CL:0000049!2.67e-10!112;CL:0002087!2.81e-08!119;CL:0000738!3.17e-08!140;CL:0002031!1.53e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.74e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.17e-08,61;CL:0002194,1.70e-07,59;CL:0000576,1.70e-07,59;CL:0000040,1.70e-07,59;CL:0000559,1.70e-07,59;CL:0002594,1.94e-07,4;CL:0000557,9.33e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.89e-37!115;UBERON:0002390!3.32e-13!102;UBERON:0003061!3.32e-13!102;UBERON:0002193!1.63e-12!112;UBERON:0002371!1.10e-11!80;UBERON:0001474!9.79e-11!86;UBERON:0004765!1.32e-09!101;UBERON:0001434!1.32e-09!101;UBERON:0003081!1.29e-08!216;UBERON:0002405!2.25e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.74e-07;4!UBERON:0004921;2.84e-07;33!UBERON:0006947;6.90e-07;3!UBERON:0004054;6.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.62e-27,114;UBERON:0001310,1.94e-07,4;UBERON:0006947,6.86e-07,3;UBERON:0004054,6.86e-07,3 | |||
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| ||
|short_description=p1@KCNMB1 | |||
}} | }} |
Latest revision as of 22:07, 16 September 2015
Short description: | p1@KCNMB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNMB1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 248bp_to_ENST00000521859, NM_004137, uc003maq.1, uc003mar.2_5end |
EntrezGene: | KCNMB1 |
HGNC: | 6285 |
UniProt: | Q16558 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.17e-08 | 61 |
monopoietic cell | 1.70e-07 | 59 |
monocyte | 1.70e-07 | 59 |
monoblast | 1.70e-07 | 59 |
promonocyte | 1.70e-07 | 59 |
smooth muscle cell of the umbilical artery | 1.94e-07 | 4 |
granulocyte monocyte progenitor cell | 9.33e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.62e-27 | 114 |
umbilical artery | 1.94e-07 | 4 |
male genital duct | 6.86e-07 | 3 |
internal male genitalia | 6.86e-07 | 3 |