FFCP PHASE1:Hg19::chr5:155753745..155753782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6444 | |EntrezGene=6444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10807 | |HGNC=10807 | ||
|TSSclassifier=strong | |||
|UniProt=Q92629 | |UniProt=Q92629 | ||
|association_with_transcript=0bp_to_ENST00000337851,ENST00000435422,ENST00000447401,NM_000337,NM_001128209,NM_172244,uc003lwb.2,uc003lwc.3,uc003lwd.3_5end | |||
|cluster_id=chr5:155753745..155753782,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_6_at_SGCD_5end | |||
|id=chr5:155753745..155753782,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.67e-23;1!UBERON:0006238;4.90e-09;10!UBERON:0003056;8.31e-09;3!UBERON:0006215;1.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.74e-12;2!DOID:3093;2.33e-08;11!DOID:5409;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.62e-12,2;DOID:3093,2.20e-08,11;DOID:5409,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.14e-32!57;UBERON:0005068!4.14e-32!57;UBERON:0006241!4.14e-32!57;UBERON:0007135!4.14e-32!57;UBERON:0005743!1.96e-29!86;UBERON:0001017!2.11e-29!82;UBERON:0000073!7.87e-29!94;UBERON:0001016!7.87e-29!94;UBERON:0000955!1.71e-28!69;UBERON:0006238!1.71e-28!69;UBERON:0007023!3.82e-26!115;UBERON:0003075!4.98e-26!86;UBERON:0007284!4.98e-26!86;UBERON:0002346!2.11e-24!90;UBERON:0002616!2.22e-24!59;UBERON:0001893!1.53e-21!34;UBERON:0002020!1.70e-21!34;UBERON:0003528!1.70e-21!34;UBERON:0002780!7.77e-21!41;UBERON:0001890!7.77e-21!41;UBERON:0006240!7.77e-21!41;UBERON:0003080!3.36e-20!42;UBERON:0002791!5.11e-20!33;UBERON:0004121!7.39e-20!169;UBERON:0000153!2.56e-19!129;UBERON:0007811!2.56e-19!129;UBERON:0000924!4.30e-19!173;UBERON:0006601!4.30e-19!173;UBERON:0001869!1.40e-18!32;UBERON:0000033!1.95e-18!123;UBERON:0001950!6.72e-17!20;UBERON:0003056!1.92e-16!61;UBERON:0002619!4.07e-15!22;UBERON:0003076!1.54e-13!15;UBERON:0003057!1.54e-13!15;UBERON:0000956!5.79e-13!25;UBERON:0000203!5.79e-13!25;UBERON:0002308!8.38e-11!9;UBERON:0000125!8.38e-11!9;UBERON:0002298!6.69e-10!8;UBERON:0000475!1.95e-09!365;UBERON:0000200!6.88e-09!6;UBERON:0004733!1.64e-08!12;UBERON:0002028!1.64e-08!12;UBERON:0007277!1.64e-08!12;UBERON:0000062!8.17e-08!511;UBERON:0002420!8.19e-08!9;UBERON:0007245!8.19e-08!9;UBERON:0010009!8.19e-08!9;UBERON:0010011!8.19e-08!9;UBERON:0000454!8.19e-08!9;UBERON:0004732!9.14e-08!13;UBERON:0002240!1.03e-07!3;UBERON:0000988!1.62e-07!3;UBERON:0001872!1.69e-07!5;UBERON:0009663!2.05e-07!7;UBERON:0002771!3.33e-07!3;UBERON:0006331!3.96e-07!3;UBERON:0000064!4.09e-07!219;UBERON:0000025!9.29e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000020;2.63e-09;23!UBERON:0001032;6.05e-09;24!UBERON:0004456;6.05e-09;24!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,6.22e-09,24;UBERON:0001032,6.22e-09,24;UBERON:0004456,6.22e-09,24;UBERON:0001723,1.40e-08,3;UBERON:0001033,1.40e-08,3;UBERON:0010056,1.40e-08,3 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68888668898764,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0.120596438625408,1.52581736317083,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,1.58186518546373,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0,0.314408610199332,0,0,0.197611631897944,0,0,0.544017803369474,0,0,0,0,0,0.244052529803926,0.500763722825999,0,0.443716206147409,0.683060432355218,1.798532254171,0,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0.511577485214607,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.380494861163441,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0.679697329768317,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.78624198594322,20.5417695252545,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,12.4232783922335,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,0.653150243690884,1.36893320434112,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p6@SGCD | |||
}} | }} |
Latest revision as of 12:41, 16 September 2015
Short description: | p6@SGCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SGCD_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000337851, ENST00000435422, ENST00000447401, NM_000337, NM_001128209, NM_172244, uc003lwb.2, uc003lwc.3, uc003lwd.3_5end |
EntrezGene: | SGCD |
HGNC: | 10807 |
UniProt: | Q92629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sense organ | 6.22e-09 | 24 |
sensory system | 6.22e-09 | 24 |
entire sense organ system | 6.22e-09 | 24 |
tongue | 1.40e-08 | 3 |
gustatory system | 1.40e-08 | 3 |
future tongue | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.62e-12 | 2 |
nervous system cancer | 2.20e-08 | 11 |
lung small cell carcinoma | 6.87e-07 | 4 |