FFCP PHASE1:Hg19::chr5:150019081..150019093,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:150019081..150019093,+ to FFCP PHASE1:Hg19::chr5:150019081..150019093,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:150019081..150019093,+ | |||
|description=CAGE_peak_at_chr5:150019081..150019093,+ | |||
|id=chr5:150019081..150019093,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.03e-22!32;CL:0000220!7.97e-18!246;CL:0002321!1.84e-17!248;CL:0000192!1.04e-14!42;CL:0000514!1.04e-14!42;CL:0000222!9.33e-14!119;CL:0000187!2.69e-10!54;CL:0000183!1.36e-09!59;CL:0000680!2.56e-09!57;CL:0000056!2.56e-09!57;CL:0000355!2.56e-09!57;CL:0000393!1.89e-08!60;CL:0000211!1.89e-08!60;CL:0002494!2.14e-08!16;CL:0002595!4.22e-08!5;CL:0000055!6.75e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.01e-30;32!CL:0002595;1.50e-20;5!CL:0000192;2.04e-17;43!CL:0002592;5.99e-13;3!CL:0002166;7.71e-12;3!CL:0002621;9.30e-12;3!CL:0002494;3.05e-11;16!CL:0002539;2.73e-09;10!CL:0002593;3.37e-09;2!CL:0002589;1.22e-08;2!CL:0000187;1.28e-08;55!CL:0000393;2.40e-07;61!CL:0000211;2.40e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.34e-31,32;CL:0000192,2.08e-22,43;CL:0000514,2.08e-22,43;CL:0002595,1.48e-20,5;CL:0000187,1.37e-16,55;CL:0000680,1.62e-15,58;CL:0000056,1.62e-15,58;CL:0000355,1.62e-15,58;CL:0000393,1.51e-14,61;CL:0000211,1.51e-14,61;CL:0002592,6.37e-13,3;CL:0002166,5.31e-12,3;CL:0002621,1.12e-11,3;CL:0002494,2.76e-11,16;CL:0000222,4.49e-10,121;CL:0002321,2.05e-09,250;CL:0002539,2.16e-09,10;CL:0002593,3.51e-09,2;CL:0002589,1.79e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.04e-17;43!CL:0000355;1.31e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.38e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.30e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.72e-22!42;UBERON:0003509!1.72e-22!42;UBERON:0004572!1.72e-22!42;UBERON:0004872!2.22e-21!84;UBERON:0003914!1.24e-20!118;UBERON:0001981!6.01e-19!60;UBERON:0007500!6.01e-19!60;UBERON:0004537!6.01e-19!60;UBERON:0006965!6.01e-19!60;UBERON:0002049!4.11e-18!79;UBERON:0007798!4.11e-18!79;UBERON:0000055!5.33e-18!69;UBERON:0004535!1.60e-17!110;UBERON:0001009!1.33e-16!113;UBERON:0004573!7.72e-15!33;UBERON:0004571!7.72e-15!33;UBERON:0000119!9.29e-13!312;UBERON:0004111!1.69e-12!241;UBERON:0000483!3.08e-12!309;UBERON:0000025!3.09e-12!194;UBERON:0000490!6.96e-12!138;UBERON:0000948!1.65e-10!24;UBERON:0005498!1.65e-10!24;UBERON:0004140!1.65e-10!24;UBERON:0009881!1.65e-10!24;UBERON:0004141!1.65e-10!24;UBERON:0003084!1.65e-10!24;UBERON:0007005!1.65e-10!24;UBERON:0004139!1.65e-10!24;UBERON:0004291!1.65e-10!24;UBERON:0000477!9.81e-10!286;UBERON:0007100!8.74e-09!27;UBERON:0001134!3.51e-08!61;UBERON:0002036!3.51e-08!61;UBERON:0003082!3.51e-08!61;UBERON:0003834!4.22e-08!5;UBERON:0001533!4.22e-08!5;UBERON:0000486!8.65e-08!82;UBERON:0003498!9.93e-08!5;UBERON:0005985!9.93e-08!5;UBERON:0002385!1.13e-07!63;UBERON:0001015!1.13e-07!63;UBERON:0000383!1.13e-07!63;UBERON:0001048!1.96e-07!168;UBERON:0005256!2.44e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.10e-22;33!UBERON:0004571;1.10e-22;33!UBERON:0003834;1.50e-20;5!UBERON:0001533;1.50e-20;5!UBERON:0001637;2.56e-19;42!UBERON:0003509;2.56e-19;42!UBERON:0004572;2.56e-19;42!UBERON:0003513;1.40e-14;7!UBERON:0003498;5.99e-13;3!UBERON:0005985;5.99e-13;3!UBERON:0001621;5.99e-13;3!UBERON:0001949;9.30e-12;3!UBERON:0000948;4.13e-10;22!UBERON:0007500;5.53e-10;56!UBERON:0001981;5.53e-10;56!UBERON:0004537;5.53e-10;56!UBERON:0004237;2.73e-09;10!UBERON:0004695;2.73e-09;10!UBERON:0002111;2.73e-09;10!UBERON:0004178;2.73e-09;10!UBERON:0002456;3.37e-09;2!UBERON:0001708;5.44e-09;4!UBERON:0008895;5.44e-09;4!UBERON:0007100;9.83e-09;25!UBERON:0001529;1.22e-08;2!UBERON:0007204;1.22e-08;2!UBERON:0000078;2.32e-08;2!UBERON:0002012;2.32e-08;2!UBERON:0008886;2.32e-08;2!UBERON:0000055;1.61e-07;65!UBERON:0002118;2.49e-07;5!UBERON:0011159;2.84e-07;5!UBERON:0000992;7.20e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.68e-27,33;UBERON:0004571,6.68e-27,33;UBERON:0001637,7.62e-26,42;UBERON:0003509,7.62e-26,42;UBERON:0004572,7.62e-26,42;UBERON:0004872,5.92e-21,83;UBERON:0003834,1.48e-20,5;UBERON:0001533,1.48e-20,5;UBERON:0003498,1.77e-19,5;UBERON:0005985,1.77e-19,5;UBERON:0007500,3.72e-19,59;UBERON:0001981,3.72e-19,59;UBERON:0004537,3.72e-19,59;UBERON:0006965,3.72e-19,59;UBERON:0000055,5.42e-16,68;UBERON:0010188,1.93e-15,6;UBERON:0002539,1.93e-15,6;UBERON:0008816,1.93e-15,6;UBERON:0003513,1.38e-14,7;UBERON:0001134,3.02e-14,62;UBERON:0002036,3.02e-14,62;UBERON:0003082,3.02e-14,62;UBERON:0000948,3.40e-14,24;UBERON:0005498,3.40e-14,24;UBERON:0004140,3.40e-14,24;UBERON:0009881,3.40e-14,24;UBERON:0004141,3.40e-14,24;UBERON:0003084,3.40e-14,24;UBERON:0007005,3.40e-14,24;UBERON:0004139,3.40e-14,24;UBERON:0004291,3.40e-14,24;UBERON:0000486,7.97e-14,83;UBERON:0002385,1.13e-13,64;UBERON:0001015,1.13e-13,64;UBERON:0000383,1.13e-13,64;UBERON:0002049,2.41e-13,78;UBERON:0007798,2.41e-13,78;UBERON:0004535,3.70e-13,109;UBERON:0003914,4.02e-13,117;UBERON:0001621,6.37e-13,3;UBERON:0001009,1.18e-12,112;UBERON:0007100,2.15e-12,27;UBERON:0002329,6.40e-12,71;UBERON:0003059,6.40e-12,71;UBERON:0007282,6.40e-12,71;UBERON:0004290,6.40e-12,71;UBERON:0009618,6.40e-12,71;UBERON:0007503,6.91e-12,78;UBERON:0003077,1.07e-11,72;UBERON:0007285,1.07e-11,72;UBERON:0001949,1.12e-11,3;UBERON:0004145,1.57e-11,3;UBERON:0007524,1.75e-11,73;UBERON:0004237,2.16e-09,10;UBERON:0004695,2.16e-09,10;UBERON:0002111,2.16e-09,10;UBERON:0004178,2.16e-09,10;UBERON:0002456,3.51e-09,2;UBERON:0001708,4.13e-09,4;UBERON:0008895,4.13e-09,4;UBERON:0001529,1.79e-08,2;UBERON:0007204,1.79e-08,2;UBERON:0000078,2.70e-08,2;UBERON:0007497,2.70e-08,2;UBERON:0003643,2.70e-08,2;UBERON:0003504,2.70e-08,2;UBERON:0003469,2.70e-08,2;UBERON:0003496,2.70e-08,2;UBERON:0002012,2.70e-08,2;UBERON:0008886,2.70e-08,2;UBERON:0007303,2.70e-08,2;UBERON:0002061,2.70e-08,2;UBERON:0005432,2.70e-08,2;UBERON:0004363,2.70e-08,2;UBERON:0005256,6.65e-08,122;UBERON:0011159,2.28e-07,5;UBERON:0000490,2.71e-07,148;UBERON:0002118,3.10e-07,5;UBERON:0003081,3.27e-07,203;UBERON:0003104,3.39e-07,160;UBERON:0009142,3.39e-07,160;UBERON:0004111,3.94e-07,240;UBERON:0000992,7.11e-07,13;UBERON:0003103,9.75e-07,68 | |||
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| ||
|short_description=p@chr5:150019081..150019093,+ | |||
}} | }} |
Latest revision as of 11:40, 30 July 2015
Short description: | p@chr5:150019081..150019093, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150019081..150019093, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.34e-31 | 32 |
smooth muscle cell | 2.08e-22 | 43 |
smooth muscle myoblast | 2.08e-22 | 43 |
smooth muscle cell of the subclavian artery | 1.48e-20 | 5 |
muscle cell | 1.37e-16 | 55 |
muscle precursor cell | 1.62e-15 | 58 |
myoblast | 1.62e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.62e-15 | 58 |
electrically responsive cell | 1.51e-14 | 61 |
electrically active cell | 1.51e-14 | 61 |
smooth muscle cell of the coronary artery | 6.37e-13 | 3 |
epithelial cell of Malassez | 5.31e-12 | 3 |
gingival epithelial cell | 1.12e-11 | 3 |
cardiocyte | 2.76e-11 | 16 |
mesodermal cell | 4.49e-10 | 121 |
embryonic cell | 2.05e-09 | 250 |
aortic smooth muscle cell | 2.16e-09 | 10 |
smooth muscle cell of the internal thoracic artery | 3.51e-09 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 1.79e-08 | 2 |
Ontology term | p-value | n |
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