FFCP PHASE1:Hg19::chr5:142149955..142150000,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:142149955..142150000,+ to FFCP PHASE1:Hg19::chr5:142149955..142150000,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23092 | |EntrezGene=23092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17073 | |HGNC=17073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000378004_5end | |||
|cluster_id=chr5:142149955..142150000,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ARHGAP26_5end | |||
|id=chr5:142149955..142150000,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.29e-29!76;CL:0002009!7.50e-28!65;CL:0002057!9.15e-27!42;CL:0002194!9.70e-27!63;CL:0000576!9.70e-27!63;CL:0000040!9.70e-27!63;CL:0000559!9.70e-27!63;CL:0000557!1.92e-25!71;CL:0000738!5.01e-25!140;CL:0000839!7.76e-23!70;CL:0000860!8.17e-23!45;CL:0002087!7.72e-21!119;CL:0002031!4.81e-19!124;CL:0000763!4.93e-19!112;CL:0000049!4.93e-19!112;CL:0000037!8.58e-19!172;CL:0000566!8.58e-19!172;CL:0000988!7.01e-17!182;CL:0002032!7.76e-17!165;CL:0000837!7.76e-17!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-20;33!CL:0002057;2.18e-20;33!CL:0000473;7.51e-19;39!CL:0000234;7.51e-19;39!CL:0000576;9.36e-19;48!CL:0000766;4.23e-14;69!CL:0002087;3.51e-07;104!CL:0000763;6.39e-07;100!CL:0000738;9.08e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.47e-33,72;CL:0002009,1.68e-32,61;CL:0002194,2.36e-31,59;CL:0000576,2.36e-31,59;CL:0000040,2.36e-31,59;CL:0000559,2.36e-31,59;CL:0000557,2.60e-29,67;CL:0000473,5.26e-29,48;CL:0000234,5.26e-29,48;CL:0000738,2.19e-27,136;CL:0000860,5.06e-27,42;CL:0002057,5.06e-27,42;CL:0000839,1.91e-26,66;CL:0002087,2.79e-23,115;CL:0000763,7.59e-22,108;CL:0000049,7.59e-22,108;CL:0002031,4.61e-21,120;CL:0000037,6.69e-21,168;CL:0002032,7.69e-19,161;CL:0000837,7.69e-19,161;CL:0000988,8.00e-19,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.62e-20;42!CL:0000049;2.43e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-32!115;UBERON:0002193!5.28e-28!112;UBERON:0002390!1.68e-27!102;UBERON:0003061!1.68e-27!102;UBERON:0002371!1.11e-20!80;UBERON:0002405!3.86e-19!115;UBERON:0001474!6.52e-18!86;UBERON:0001049!8.20e-14!57;UBERON:0005068!8.20e-14!57;UBERON:0006241!8.20e-14!57;UBERON:0007135!8.20e-14!57;UBERON:0002616!3.30e-12!59;UBERON:0004765!8.40e-12!101;UBERON:0001434!8.40e-12!101;UBERON:0003080!2.28e-11!42;UBERON:0002780!3.24e-11!41;UBERON:0001890!3.24e-11!41;UBERON:0006240!3.24e-11!41;UBERON:0001893!1.14e-09!34;UBERON:0002020!1.38e-09!34;UBERON:0003528!1.38e-09!34;UBERON:0001017!2.05e-09!82;UBERON:0000955!2.85e-09!69;UBERON:0006238!2.85e-09!69;UBERON:0001869!3.00e-09!32;UBERON:0002791!3.27e-09!33;UBERON:0005743!1.27e-08!86;UBERON:0002619!1.41e-08!22;UBERON:0000073!1.81e-08!94;UBERON:0001016!1.81e-08!94;UBERON:0003075!4.76e-08!86;UBERON:0007284!4.76e-08!86;UBERON:0001950!8.44e-08!20;UBERON:0000178!3.11e-07!15;UBERON:0000179!3.11e-07!15;UBERON:0000463!3.11e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.61e-09;114!UBERON:0002619;8.81e-09;22!UBERON:0001893;2.04e-08;34!UBERON:0002780;2.44e-08;41!UBERON:0001890;2.44e-08;41!UBERON:0001869;2.57e-08;32!UBERON:0003528;3.21e-08;34!UBERON:0002020;3.21e-08;34!UBERON:0002791;3.98e-08;32!UBERON:0001950;5.50e-08;20!UBERON:0000073;1.53e-07;53!UBERON:0002616;1.53e-07;53!UBERON:0000178;2.50e-07;15!UBERON:0000179;2.50e-07;15!UBERON:0000463;2.50e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.19e-32,114;UBERON:0002193,1.90e-31,108;UBERON:0002390,4.20e-31,98;UBERON:0003061,4.20e-31,98;UBERON:0002405,4.27e-25,93;UBERON:0002371,3.97e-24,76;UBERON:0001474,8.01e-21,82;UBERON:0004765,4.98e-16,90;UBERON:0001049,1.70e-13,56;UBERON:0005068,1.70e-13,56;UBERON:0006241,1.70e-13,56;UBERON:0007135,1.70e-13,56;UBERON:0001434,1.69e-12,100;UBERON:0000073,1.92e-12,53;UBERON:0002616,1.92e-12,53;UBERON:0002780,4.57e-11,41;UBERON:0001890,4.57e-11,41;UBERON:0003080,4.57e-11,41;UBERON:0006240,4.57e-11,41;UBERON:0001893,1.67e-09,34;UBERON:0003528,2.02e-09,34;UBERON:0002020,2.02e-09,34;UBERON:0001869,4.44e-09,32;UBERON:0001017,5.75e-09,81;UBERON:0000955,7.33e-09,68;UBERON:0006238,7.33e-09,68;UBERON:0002791,7.76e-09,32;UBERON:0001016,9.52e-09,89;UBERON:0003081,1.13e-08,203;UBERON:0002619,1.20e-08,22;UBERON:0003075,6.07e-08,82;UBERON:0007284,6.07e-08,82;UBERON:0001950,7.29e-08,20;UBERON:0000178,2.72e-07,15;UBERON:0000179,2.72e-07,15;UBERON:0000463,2.72e-07,15 | |||
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| ||
|short_description=p1@ARHGAP26 | |||
}} | }} |
Latest revision as of 07:06, 25 September 2015
Short description: | p1@ARHGAP26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP26_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000378004_5end |
EntrezGene: | ARHGAP26 |
HGNC: | 17073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.47e-33 | 72 |
macrophage dendritic cell progenitor | 1.68e-32 | 61 |
monopoietic cell | 2.36e-31 | 59 |
monocyte | 2.36e-31 | 59 |
monoblast | 2.36e-31 | 59 |
promonocyte | 2.36e-31 | 59 |
granulocyte monocyte progenitor cell | 2.60e-29 | 67 |
defensive cell | 5.26e-29 | 48 |
phagocyte | 5.26e-29 | 48 |
leukocyte | 2.19e-27 | 136 |
classical monocyte | 5.06e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.06e-27 | 42 |
myeloid lineage restricted progenitor cell | 1.91e-26 | 66 |
nongranular leukocyte | 2.79e-23 | 115 |
myeloid cell | 7.59e-22 | 108 |
common myeloid progenitor | 7.59e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 4.61e-21 | 120 |
hematopoietic stem cell | 6.69e-21 | 168 |
hematopoietic oligopotent progenitor cell | 7.69e-19 | 161 |
hematopoietic multipotent progenitor cell | 7.69e-19 | 161 |
hematopoietic cell | 8.00e-19 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.19e-32 | 114 |
hemolymphoid system | 1.90e-31 | 108 |
hematopoietic system | 4.20e-31 | 98 |
blood island | 4.20e-31 | 98 |
immune system | 4.27e-25 | 93 |
bone marrow | 3.97e-24 | 76 |
bone element | 8.01e-21 | 82 |
skeletal element | 4.98e-16 | 90 |
neural tube | 1.70e-13 | 56 |
neural rod | 1.70e-13 | 56 |
future spinal cord | 1.70e-13 | 56 |
neural keel | 1.70e-13 | 56 |
skeletal system | 1.69e-12 | 100 |
regional part of nervous system | 1.92e-12 | 53 |
regional part of brain | 1.92e-12 | 53 |
regional part of forebrain | 4.57e-11 | 41 |
forebrain | 4.57e-11 | 41 |
anterior neural tube | 4.57e-11 | 41 |
future forebrain | 4.57e-11 | 41 |
telencephalon | 1.67e-09 | 34 |
brain grey matter | 2.02e-09 | 34 |
gray matter | 2.02e-09 | 34 |
cerebral hemisphere | 4.44e-09 | 32 |
central nervous system | 5.75e-09 | 81 |
brain | 7.33e-09 | 68 |
future brain | 7.33e-09 | 68 |
regional part of telencephalon | 7.76e-09 | 32 |
nervous system | 9.52e-09 | 89 |
lateral plate mesoderm | 1.13e-08 | 203 |
regional part of cerebral cortex | 1.20e-08 | 22 |
neural plate | 6.07e-08 | 82 |
presumptive neural plate | 6.07e-08 | 82 |
neocortex | 7.29e-08 | 20 |
blood | 2.72e-07 | 15 |
haemolymphatic fluid | 2.72e-07 | 15 |
organism substance | 2.72e-07 | 15 |