FFCP PHASE1:Hg19::chr5:133450365..133450444,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:133450365..133450444,+ to FFCP PHASE1:Hg19::chr5:133450365..133450444,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6932 | |EntrezGene=6932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11639 | |HGNC=11639 | ||
|TSSclassifier=strong | |||
|UniProt=P36402,B7WNT5 | |UniProt=P36402,B7WNT5 | ||
|association_with_transcript=0bp_to_ENST00000321584,ENST00000321603,ENST00000342854,ENST00000361590,ENST00000378564,ENST00000395029,NM_003202,uc003kyt.2_5end | |||
|cluster_id=chr5:133450365..133450444,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_TCF7_5end | |||
|id=chr5:133450365..133450444,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.06e-12!53;CL:0000051!5.06e-12!53;CL:0000838!6.88e-12!52;CL:0000791!1.49e-10!18;CL:0000789!1.49e-10!18;CL:0002420!1.49e-10!18;CL:0002419!1.49e-10!18;CL:0000790!1.49e-10!18;CL:0000084!5.54e-10!25;CL:0000827!5.54e-10!25;CL:0000625!1.85e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.88e-11;18!CL:0000789;7.88e-11;18!CL:0002419;7.88e-11;18!CL:0000084;2.09e-10;25!CL:0000625;1.47e-08;11!CL:0000542;6.24e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.83e-12,53;CL:0000051,2.83e-12,53;CL:0000838,3.85e-12,52;CL:0000791,8.86e-11,18;CL:0000789,8.86e-11,18;CL:0002420,8.86e-11,18;CL:0002419,8.86e-11,18;CL:0000790,8.86e-11,18;CL:0000084,2.03e-10,25;CL:0000827,2.03e-10,25;CL:0000625,1.60e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.88e-11;18!CL:0000051;6.24e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.93e-08!15;UBERON:0000179!1.93e-08!15;UBERON:0000463!1.93e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;1.61e-08;32!UBERON:0000178;1.72e-08;15!UBERON:0000179;1.72e-08;15!UBERON:0000463;1.72e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.67e-08,15;UBERON:0000179,1.67e-08,15;UBERON:0000463,1.67e-08,15 | |||
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| ||
|short_description=p1@TCF7 | |||
}} | }} |
Latest revision as of 07:36, 20 September 2015
Short description: | p1@TCF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF7_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000321584, ENST00000321603, ENST00000342854, ENST00000361590, ENST00000378564, ENST00000395029, NM_003202, uc003kyt.2_5end |
EntrezGene: | TCF7 |
HGNC: | 11639 |
UniProt: | P36402B7WNT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.83e-12 | 53 |
common lymphoid progenitor | 2.83e-12 | 53 |
lymphoid lineage restricted progenitor cell | 3.85e-12 | 52 |
mature alpha-beta T cell | 8.86e-11 | 18 |
alpha-beta T cell | 8.86e-11 | 18 |
immature T cell | 8.86e-11 | 18 |
mature T cell | 8.86e-11 | 18 |
immature alpha-beta T cell | 8.86e-11 | 18 |
T cell | 2.03e-10 | 25 |
pro-T cell | 2.03e-10 | 25 |
CD8-positive, alpha-beta T cell | 1.60e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 1.67e-08 | 15 |
haemolymphatic fluid | 1.67e-08 | 15 |
organism substance | 1.67e-08 | 15 |