FFCP PHASE1:Hg19::chr5:130588705..130588725,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:130588705..130588725,+ to FFCP PHASE1:Hg19::chr5:130588705..130588725,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56990 | |EntrezGene=56990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18547 | |HGNC=18547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000511432_5end | |||
|cluster_id=chr5:130588705..130588725,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_CDC42SE2_5end | |||
|id=chr5:130588705..130588725,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.33e-62!172;CL:0000566!4.33e-62!172;CL:0000738!7.16e-62!140;CL:0000988!4.24e-57!182;CL:0002032!4.39e-57!165;CL:0000837!4.39e-57!165;CL:0002087!2.29e-47!119;CL:0002031!5.99e-47!124;CL:0000542!7.80e-29!53;CL:0000051!7.80e-29!53;CL:0000838!4.32e-28!52;CL:0000763!5.04e-27!112;CL:0000049!5.04e-27!112;CL:0000766!2.64e-25!76;CL:0000084!3.35e-20!25;CL:0000827!3.35e-20!25;CL:0000791!3.35e-19!18;CL:0000789!3.35e-19!18;CL:0002420!3.35e-19!18;CL:0002419!3.35e-19!18;CL:0000790!3.35e-19!18;CL:0000839!3.76e-19!70;CL:0000557!1.20e-18!71;CL:0002194!1.77e-16!63;CL:0000576!1.77e-16!63;CL:0000040!1.77e-16!63;CL:0000559!1.77e-16!63;CL:0002009!2.61e-16!65;CL:0002057!4.19e-15!42;CL:0000860!2.43e-13!45;CL:0000625!1.12e-12!11;CL:0000134!5.95e-11!358;CL:0002320!4.46e-10!365;CL:0000094!2.03e-08!8;CL:0000945!6.07e-08!24;CL:0000826!6.07e-08!24;CL:0000219!1.05e-07!390;CL:0000624!3.02e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.43e-35;25!CL:0000791;2.37e-32;18!CL:0000789;2.37e-32;18!CL:0002419;2.37e-32;18!CL:0000625;6.17e-21;11!CL:0000542;4.23e-19;53!CL:0000094;1.27e-13;8!CL:0002087;1.04e-11;104!CL:0000624;1.78e-11;6!CL:0000081;1.94e-09;11!CL:0000738;3.77e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.23e-48,136;CL:0000037,4.51e-39,168;CL:0002032,2.47e-37,161;CL:0000837,2.47e-37,161;CL:0002087,2.33e-36,115;CL:0000988,5.43e-36,177;CL:0000084,4.96e-35,25;CL:0000827,4.96e-35,25;CL:0000542,4.02e-34,53;CL:0000051,4.02e-34,53;CL:0002031,1.27e-33,120;CL:0000838,6.34e-33,52;CL:0000791,2.28e-32,18;CL:0000789,2.28e-32,18;CL:0002420,2.28e-32,18;CL:0002419,2.28e-32,18;CL:0000790,2.28e-32,18;CL:0000625,6.00e-21,11;CL:0000766,2.08e-14,72;CL:0000094,1.61e-13,8;CL:0000624,1.75e-11,6;CL:0000763,2.61e-10,108;CL:0000049,2.61e-10,108;CL:0000134,1.27e-09,354;CL:0000081,2.29e-09,11;CL:0002320,4.46e-09,361;CL:0000839,1.30e-07,66;CL:0000557,2.04e-07,67;CL:0000219,3.35e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;2.37e-32;18!CL:0000051;4.23e-19;53 | |||
|ontology_enrichment_disease=DOID:2531!5.12e-09!51;DOID:0060083!5.12e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-28!102;UBERON:0003061!1.73e-28!102;UBERON:0002193!6.23e-26!112;UBERON:0002371!4.33e-16!80;UBERON:0001474!8.26e-14!86;UBERON:0002405!1.81e-13!115;UBERON:0000178!3.39e-10!15;UBERON:0000179!3.39e-10!15;UBERON:0000463!3.39e-10!15;UBERON:0004765!6.06e-10!101;UBERON:0001434!6.06e-10!101;UBERON:0002384!1.35e-09!375;UBERON:0007023!2.55e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-15;15!UBERON:0000179;1.41e-15;15!UBERON:0000463;1.41e-15;15!UBERON:0002390;3.27e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.77e-17,98;UBERON:0003061,2.77e-17,98;UBERON:0002193,9.85e-17,108;UBERON:0000178,1.51e-15,15;UBERON:0000179,1.51e-15,15;UBERON:0000463,1.51e-15,15;UBERON:0002405,2.29e-08,93;UBERON:0002384,2.42e-08,371;UBERON:0002370,2.91e-07,4;UBERON:0005058,2.91e-07,4;UBERON:0009113,2.91e-07,4;UBERON:0003295,2.91e-07,4;UBERON:0005562,2.91e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.68109492645493,1.64201178899891,1.8890587515283,3.14691421479123,8.06041736004147,1.08371286321253,0,0,0,2.63388481973026,0.284338464974843,0.293600439334847,1.66198622559563,1.60435557976113,3.25516306073778,0.223915474239924,2.59114932815184,1.54545340580512,0.726991193897824,0.377875943688809,0,0.232429036905685,0,0,1.1507695692886,2.0492856522328,1.18241114944293,1.03423704220986,0,0,0,0.545812300115692,0.898893937780338,0.918251677112708,0.320929027076094,0.639337125799041,2.63881040149373,0.797854630486527,0.852449501065388,0,2.8369261234557,3.11411124497787,0.502497330513487,3.65038042894141,1.08594422352558,1.21079900526674,2.57794345191295,3.48108626184973,0.211255286311942,0.212604299965044,0.838634582033504,0.673971786878971,0.300353785683013,1.12507910687956,0.570025487482497,0.19891667719909,0.91332076882317,0,1.63841583378639,0,0.426730222566507,1.20118796110804,0.574752439954483,1.32208974556972,0.954053754535364,0,0.587237189370939,0,1.32171328579026,1.12101712596307,0.263384084775077,15.9334913792205,7.07419372948497,10.074473450976,13.8764791174263,3.91106719960308,4.2610302516126,3.89653456815823,45.1212350384953,14.1410835587922,14.621237042519,17.331447280961,34.4565650062066,35.246083188727,7.07082989795807,11.8830507647915,16.518775886898,8.15576097391332,9.89901063931938,12.5442628565972,24.021580651884,15.3288197440768,20.2740192834752,40.4831507231205,19.1139248594458,16.9281698002669,14.2567806667256,16.8644133367106,19.0700050620083,22.4875307794223,24.8616114646218,13.9591759476578,11.4915843638097,9.89528724398977,11.2963035028583,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0.97364218096405,1.0447784237956,0.531831842075461,1.90792499444274,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.445893486866185,0,0,0,0.0895585227028483,0,0,2.46331618947972,0.880484340132261,1.65862492432618,1.15295962733569,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50970464756633,7.68419964787516,6.90008239550455,6.16046574142792,0,0,0,0.167516265334349,0,8.23907726341901,8.97484377612075,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99627275756373,6.03999762292127,5.22965033236877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,6.5968189200182,6.117097657139,5.69647187174163,8.81457569193819,12.752230465672,9.07862635669804,9.18053443304795,12.6900028207083,0,0,0,2.04383492638291,0.721346064882224,0,1.75368900001705,0.199579371432817,0.191505370132367,0.211673582723883,0.649243880549111,0.842391534340376,1.14117339516596,0,0,0,0.1605880751037,0,0.851692475380653,1.37402137902306,0.614481528616916,1.11838053946208,0.500547425135725,0.781552381608161,0,1.23087398947712,0,0,0,0,0.439524537815682,0,4.79206552393157,0,1.43246690842614,0,0,0,0,0,1.48323486804084,0,0,2.76283915531148,0,0,1.84627208191604,0,0,0,0,0.591860433821602,9.57932369387759,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0.219385397153973,0,0,0.615602068030377,0,0,6.10351981986451,0,4.46601623624687,0.183195186803725,6.39641731222362,7.15353087370155,0,0.498635045700469,0.225595660617181,0.392125068635479,0,0,0.635746315921515,0,0,0,0,0,0.265372693510018,0.611030144933625,0.296521128680622,0,0,0.134802265961354,0,0,0.182454789215666,0,0,1.97292201424695,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0.146552233678082,0,0,0.13223260174269,0,0,3.20362237703084,0.157204305099666,0.828478110694391,3.47316215268366,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,1.36402216187572,2.12583744501381,0.654261577023377,0,0,0,1.19992437512958,0.426766918776564,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0.678930119816101,0,0.371807292777007,0.558644917973244,0,0.867479195013787,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0.703484977438482,0,0,0.336283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| ||
|short_description=p4@CDC42SE2 | |||
}} | }} |
Latest revision as of 03:31, 20 September 2015
Short description: | p4@CDC42SE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDC42SE2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000511432_5end |
EntrezGene: | CDC42SE2 |
HGNC: | 18547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.23e-48 | 136 |
hematopoietic stem cell | 4.51e-39 | 168 |
hematopoietic oligopotent progenitor cell | 2.47e-37 | 161 |
hematopoietic multipotent progenitor cell | 2.47e-37 | 161 |
nongranular leukocyte | 2.33e-36 | 115 |
hematopoietic cell | 5.43e-36 | 177 |
T cell | 4.96e-35 | 25 |
pro-T cell | 4.96e-35 | 25 |
lymphocyte | 4.02e-34 | 53 |
common lymphoid progenitor | 4.02e-34 | 53 |
hematopoietic lineage restricted progenitor cell | 1.27e-33 | 120 |
lymphoid lineage restricted progenitor cell | 6.34e-33 | 52 |
mature alpha-beta T cell | 2.28e-32 | 18 |
alpha-beta T cell | 2.28e-32 | 18 |
immature T cell | 2.28e-32 | 18 |
mature T cell | 2.28e-32 | 18 |
immature alpha-beta T cell | 2.28e-32 | 18 |
CD8-positive, alpha-beta T cell | 6.00e-21 | 11 |
myeloid leukocyte | 2.08e-14 | 72 |
granulocyte | 1.61e-13 | 8 |
CD4-positive, alpha-beta T cell | 1.75e-11 | 6 |
myeloid cell | 2.61e-10 | 108 |
common myeloid progenitor | 2.61e-10 | 108 |
mesenchymal cell | 1.27e-09 | 354 |
blood cell | 2.29e-09 | 11 |
connective tissue cell | 4.46e-09 | 361 |
myeloid lineage restricted progenitor cell | 1.30e-07 | 66 |
granulocyte monocyte progenitor cell | 2.04e-07 | 67 |
motile cell | 3.35e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.77e-17 | 98 |
blood island | 2.77e-17 | 98 |
hemolymphoid system | 9.85e-17 | 108 |
blood | 1.51e-15 | 15 |
haemolymphatic fluid | 1.51e-15 | 15 |
organism substance | 1.51e-15 | 15 |
immune system | 2.29e-08 | 93 |
connective tissue | 2.42e-08 | 371 |
thymus | 2.91e-07 | 4 |
hemolymphoid system gland | 2.91e-07 | 4 |
thymic region | 2.91e-07 | 4 |
pharyngeal gland | 2.91e-07 | 4 |
thymus primordium | 2.91e-07 | 4 |