FFCP PHASE1:Hg19::chr5:1041879..1041917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:1041879..1041917,+ | |||
|coexpression_cluster_id=C1947 | |||
|description=CAGE_peak_at_chr5:1041879..1041917,+ | |||
|id=chr5:1041879..1041917,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000487;1.82e-11;2!CL:0002178;5.18e-08;3!CL:0000214;5.54e-08;3!CL:0000746;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,1.82e-11,2;CL:0002178,5.18e-08,3;CL:0000214,5.54e-08,3;CL:0000746,7.26e-08,3;CL:0000513,7.26e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000513;7.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.98e-13!115;UBERON:0002619!4.89e-10!22;UBERON:0002020!1.66e-09!34;UBERON:0003528!1.66e-09!34;UBERON:0001950!3.82e-09!20;UBERON:0001049!5.19e-09!57;UBERON:0005068!5.19e-09!57;UBERON:0006241!5.19e-09!57;UBERON:0007135!5.19e-09!57;UBERON:0000956!1.39e-08!25;UBERON:0000203!1.39e-08!25;UBERON:0002791!2.05e-08!33;UBERON:0003101!2.75e-08!22;UBERON:0000079!2.75e-08!22;UBERON:0001893!4.36e-08!34;UBERON:0001017!7.52e-08!82;UBERON:0001869!2.31e-07!32;UBERON:0002780!2.78e-07!41;UBERON:0001890!2.78e-07!41;UBERON:0006240!2.78e-07!41;UBERON:0005743!3.02e-07!86;UBERON:0000955!3.36e-07!69;UBERON:0006238!3.36e-07!69;UBERON:0003080!4.88e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.71e-21;1!UBERON:0006518;5.71e-21;1!UBERON:0008949;5.71e-21;1!UBERON:0000101;5.71e-21;1!UBERON:0002167;5.71e-21;1!UBERON:0002771;3.52e-11;2!UBERON:0006915;5.54e-08;3!UBERON:0007616;5.54e-08;3!UBERON:0002217;5.54e-08;3!UBERON:0002018;5.54e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.43e-21,1;UBERON:0006518,9.43e-21,1;UBERON:0008949,9.43e-21,1;UBERON:0000101,9.43e-21,1;UBERON:0002167,9.43e-21,1;UBERON:0002771,4.09e-11,2;UBERON:0006915,5.54e-08,3;UBERON:0007616,5.54e-08,3;UBERON:0002217,5.54e-08,3;UBERON:0002018,5.54e-08,3 | |||
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| ||
|short_description=p@chr5:1041879..1041917,+ | |||
}} | }} |
Latest revision as of 08:26, 30 July 2015
Short description: | p@chr5:1041879..1041917, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1041879..1041917, + |
Coexpression cluster: | C1947_Smooth_synovial_small_gastric_parietal_Cardiac_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 1.82e-11 | 2 |
epithelial cell of stomach | 5.18e-08 | 3 |
synovial cell | 5.54e-08 | 3 |
cardiac muscle cell | 7.26e-08 | 3 |
cardiac muscle myoblast | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.43e-21 | 1 |
right lung lobe | 9.43e-21 | 1 |
lower lobe of lung | 9.43e-21 | 1 |
lobe of lung | 9.43e-21 | 1 |
right lung | 9.43e-21 | 1 |
middle temporal gyrus | 4.09e-11 | 2 |
stratified squamous epithelium | 5.54e-08 | 3 |
layer of synovial tissue | 5.54e-08 | 3 |
synovial joint | 5.54e-08 | 3 |
synovial membrane of synovial joint | 5.54e-08 | 3 |