FFCP PHASE1:Hg19::chr4:90816511..90816518,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:90816511..90816518,+ to FFCP PHASE1:Hg19::chr4:90816511..90816518,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22915 | |EntrezGene=22915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7178 | |HGNC=7178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=388bp_to_AB385146,HQ258009_5end | |||
|cluster_id=chr4:90816511..90816518,+ | |||
|coexpression_cluster_id=C1946 | |||
|description=CAGE_peak_12_at_MMRN1_5end | |||
|id=chr4:90816511..90816518,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.00e-29!24;CL:0000115!2.85e-19!35;CL:0000071!3.85e-19!18;CL:0002546!3.85e-19!18;CL:0002078!9.52e-15!44;CL:0000784!9.94e-15!3;CL:1000413!1.43e-12!9;CL:0005020!2.21e-12!6;CL:0002138!2.21e-12!6;CL:0005022!2.21e-12!6;CL:0000213!9.50e-11!57;CL:0000215!9.50e-11!57;CL:0002544!2.18e-07!6;CL:0002144!3.48e-07!3;CL:0002618!4.71e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002144;2.74e-12;3!CL:0002138;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.59e-12,3;CL:0005020,9.49e-07,6;CL:0002138,9.49e-07,6;CL:0005022,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.85e-19!18;UBERON:0004638!3.85e-19!18;UBERON:0004852!3.85e-19!18;UBERON:0000487!2.30e-15!22;UBERON:0006914!2.52e-13!25;UBERON:0003915!1.43e-12!9;UBERON:0004700!1.43e-12!9;UBERON:0001917!1.43e-12!9;UBERON:0002465!2.63e-11!10;UBERON:0000055!7.47e-10!69;UBERON:0001473!2.63e-09!8;UBERON:0004536!2.63e-09!8;UBERON:0006558!2.63e-09!8;UBERON:0002049!3.11e-08!79;UBERON:0007798!3.11e-08!79;UBERON:0001915!3.48e-07!3;UBERON:0001982!3.48e-07!3;UBERON:0006947!4.71e-07!3;UBERON:0004054!4.71e-07!3;UBERON:0004535!6.41e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.74e-12;3!UBERON:0001915;2.74e-12;3!UBERON:0001982;2.74e-12;3!UBERON:0000945;5.54e-08;5!UBERON:0010039;5.54e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.59e-12,3;UBERON:0001915,2.59e-12,3;UBERON:0001982,2.59e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.410502947249729,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0,0.208994966536811,0,1.06729878806013,0.33472061276467,0,1.52054421143703,0.24406205754817,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,3.89768643453339,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55063448114339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,1.97610423125813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.410502947249729,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0,0.208994966536811,0,1.06729878806013,0.33472061276467,0,1.52054421143703,0.24406205754817,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,3.89768643453339,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55063448114339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0,0,1.97610423125813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p12@MMRN1 | |||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p12@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MMRN1_5end |
Coexpression cluster: | C1946_gastric_acute_rhabdomyosarcoma_Dendritic_Endothelial_B_Wilms |
Association with transcript: | 388bp_to_AB385146, HQ258009_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.59e-12 | 3 |
lymphangioblast | 9.49e-07 | 6 |
endothelial cell of lymphatic vessel | 9.49e-07 | 6 |
vascular lymphangioblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.59e-12 | 3 |
endothelium of capillary | 2.59e-12 | 3 |
capillary | 2.59e-12 | 3 |