FFCP PHASE1:Hg19::chr4:75858349..75858360,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:75858349..75858360,+ to FFCP PHASE1:Hg19::chr4:75858349..75858360,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25849 | |EntrezGene=25849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24536 | |HGNC=24536 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWI2 | |UniProt=Q6UWI2 | ||
|association_with_transcript=23bp_to_ENST00000307428_5end | |||
|cluster_id=chr4:75858349..75858360,+ | |||
|coexpression_cluster_id=C4424 | |||
|description=CAGE_peak_2_at_PARM1_5end | |||
|id=chr4:75858349..75858360,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.18e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.63e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.01e-09;82!UBERON:0006603;5.25e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-51!115;UBERON:0001049!1.54e-19!57;UBERON:0005068!1.54e-19!57;UBERON:0006241!1.54e-19!57;UBERON:0007135!1.54e-19!57;UBERON:0002346!6.09e-19!90;UBERON:0003075!1.73e-17!86;UBERON:0007284!1.73e-17!86;UBERON:0003080!1.95e-17!42;UBERON:0005743!2.15e-17!86;UBERON:0002780!8.13e-17!41;UBERON:0001890!8.13e-17!41;UBERON:0006240!8.13e-17!41;UBERON:0000073!9.63e-17!94;UBERON:0001016!9.63e-17!94;UBERON:0001017!1.10e-16!82;UBERON:0002616!2.94e-15!59;UBERON:0002020!5.58e-14!34;UBERON:0003528!5.58e-14!34;UBERON:0001893!6.35e-14!34;UBERON:0001869!1.92e-13!32;UBERON:0002791!2.31e-13!33;UBERON:0000955!3.03e-13!69;UBERON:0006238!3.03e-13!69;UBERON:0003056!8.22e-13!61;UBERON:0002619!1.40e-12!22;UBERON:0001950!6.92e-12!20;UBERON:0000924!7.93e-11!173;UBERON:0006601!7.93e-11!173;UBERON:0000956!4.04e-10!25;UBERON:0000203!4.04e-10!25;UBERON:0004121!8.16e-10!169;UBERON:0000153!1.08e-09!129;UBERON:0007811!1.08e-09!129;UBERON:0000033!8.17e-09!123;UBERON:0000468!4.25e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.66e-17;114!UBERON:0002619;1.03e-13;22!UBERON:0001869;1.17e-13;32!UBERON:0003528;3.94e-13;34!UBERON:0002020;3.94e-13;34!UBERON:0001950;1.15e-12;20!UBERON:0002791;1.62e-12;32!UBERON:0001893;3.11e-12;34!UBERON:0002780;4.96e-12;41!UBERON:0001890;4.96e-12;41!UBERON:0000956;1.92e-11;25!UBERON:0000203;1.92e-11;25!UBERON:0000073;1.21e-08;53!UBERON:0002616;1.21e-08;53!UBERON:0001017;4.14e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.72e-65,114;UBERON:0001049,1.62e-17,56;UBERON:0005068,1.62e-17,56;UBERON:0006241,1.62e-17,56;UBERON:0007135,1.62e-17,56;UBERON:0002780,7.10e-17,41;UBERON:0001890,7.10e-17,41;UBERON:0003080,7.10e-17,41;UBERON:0006240,7.10e-17,41;UBERON:0000073,6.84e-16,53;UBERON:0002616,6.84e-16,53;UBERON:0002346,2.38e-15,86;UBERON:0001869,4.28e-15,32;UBERON:0003528,7.28e-15,34;UBERON:0002020,7.28e-15,34;UBERON:0002619,8.60e-14,22;UBERON:0001893,8.94e-14,34;UBERON:0002791,1.16e-13,32;UBERON:0003075,1.81e-13,82;UBERON:0007284,1.81e-13,82;UBERON:0001017,3.37e-13,81;UBERON:0001950,8.99e-13,20;UBERON:0000955,1.26e-11,68;UBERON:0006238,1.26e-11,68;UBERON:0000956,1.65e-11,25;UBERON:0000203,1.65e-11,25;UBERON:0001016,2.52e-11,89;UBERON:0003056,7.06e-11,61;UBERON:0010314,1.33e-09,132;UBERON:0010371,2.39e-09,104;UBERON:0011216,1.97e-08,223;UBERON:0004121,5.58e-07,171;UBERON:0000924,5.58e-07,171;UBERON:0006601,5.58e-07,171 | |||
|phase1_expression=8.3572054464456,4.71021152560163,3.24195129420734,13.009528785907,12.9618717383913,15.7020934338066,2.53299878168311,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0,0,0,4.43197753338117,3.69452652524756,5.19491156670283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,1.77901850772711,0,0.800791974072025,1.72425731986345,1.32208974556972,0,0.569212969109448,0.587237189370939,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.756278537312543,0,0.087834785693126,6.41797469938792,0,0,1.9472843619281,3.65672448328461,2.26028532882071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.365921118388786,0,0.69716365721711,0.310983165046111,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,1.47798971368783,0.352193736052904,0.621984346622316,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,1.42198887333556,3.57656445851882,0,0,0,0,0,0,0.57191197463259,19.5343777940919,0,0,0.355391948742546,0,0,0,0.599837947092342,0,0,0,0,0,0,1.44781306667579,0.61642896765115,0.358121926479791,0,0,0,0,1.52456774533478,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,1.68808170616869,0.280660094433074,0.128139149255701,5.11707249066703,2.73451665944133,10.3892646511494,0,0.177561725313127,0.164254312027618,0,0,0.241718899183244,0,0.0920809889358963,0.34444334449382,0,0.524497659837696,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,1.02580050046556,0,0.325378394664303,3.91555844261345,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0,1.15741646340759,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,1.09814811894422,0.235624804691373,0.202182481573316,0,0,0,1.46228093778771,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,0,0,0.379473173765715,0,0,0,0,3.29503302718727,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0.18714054040822,7.76493350141038,0,0,0,0,0,0,9.94147647766298,1.54736358051564,0,0,0,16.5375830248388,10.2225048746525,2.01546198283421,0,0.492339221844278,0,0,0.537063524026827,0,10.357557591878,0,0,5.81599647657131,4.45286871176886,0,0,1.92411999991631,5.07499702804355,0.1137934482855,0,0,0,0.583209226766509,8.33399975679803,2.65722415744152,2.77371808838438,0,0.221158519862449,0.591095237907095,5.04586413454137,0,0.139423744278603,7.54112533337211,0,0,0,0,4.14701507651495,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,7.96209544862804,3.27292988662355,13.4426631885398,1.18608451472249,0.86494757262552,1.46190729307638,0.67401132980677,4.01288823649394,1.40558667435203,0.729819156862664,0.391329237864179,0.242780379534093,11.0483632797829,2.41981432097328,0.61214552326098,7.58238955541856,0.300646838828985,0.72581733978073,0,0,0,0,0.284609546029793,0,0,0,0,10.8330534310059,0,0,0,0,3.20063754411784,0.353024506766001,5.19755703795225,0,0,3.67202616544096,0,0.240476460754601,4.90941887900511,1.39866726707491,1.00863292007874,0,7.20698991020251,0,0,0,0,0,0,0,3.00210144354895,0.547621515567972,0,0,0,15.6398144712462,13.2913045926777,4.30723814746088,4.79229601197579,10.3014251552777,12.7207730741867,20.4909591084515,0,0,0,0,0.0674035438541849,0,0,1.59045937961861,1.0896272488926,0.482259445395058,0.275078873194468,0.415440338029185,9.22392955361152,3.86900977278975,4.49546719269382,0,10.0871305342974,6.39945975246977,0,0.179287339332845,0.383830394638891,19.2967738120809,13.2418394073086,0,0,12.0991008768177,1.95952416065645,0,0,0,0,0.439656701034247,0,1.55139547633861,2.77688463659649,0.513260513652988,0.704815022316672,6.62081957919707,11.4759142722756,4.97086866416635,4.46549419630756,1.38328142328561,3.41019275466509,0,1.08803560673895,5.5151776684994,1.53172788381731,1.31149052283922,0.157054096250234,7.97461361970287,4.88105059607853,3.004582336956,3.44045517414043,1.44207766997908,2.29756690883119,0.415045904808692,0.249960815924213,0,0,0.235265819698172,0.936669811613763,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,4.50327341887344,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0.584580926518165,1.46151324344699,0.817826971279221,0,0,0,2.99981093782395,0,2.06657975592979,0,0,0,0,0.127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| 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| ||
|short_description=p2@PARM1 | |||
}} | }} |
Latest revision as of 16:06, 18 September 2015
Short description: | p2@PARM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PARM1_5end |
Coexpression cluster: | C4424_somatostatinoma_pineal_neuroectodermal_retina_thyroid_Mesenchymal_left |
Association with transcript: | 23bp_to_ENST00000307428_5end |
EntrezGene: | PARM1 |
HGNC: | 24536 |
UniProt: | Q6UWI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.63e-07 | 15 |