FFCP PHASE1:Hg19::chr4:56413032..56413056,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:56413032..56413056,- to FFCP PHASE1:Hg19::chr4:56413032..56413056,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9575 | |EntrezGene=9575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2082 | |HGNC=2082 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506923_5end | |||
|cluster_id=chr4:56413032..56413056,- | |||
|description=CAGE_peak_2_at_CLOCK_5end | |||
|id=chr4:56413032..56413056,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.52e-08!82;UBERON:0000062!6.14e-08!511;UBERON:0005743!1.19e-07!86;UBERON:0000468!2.01e-07!659;UBERON:0000073!3.56e-07!94;UBERON:0001016!3.56e-07!94;UBERON:0000955!4.81e-07!69;UBERON:0006238!4.81e-07!69;UBERON:0001049!6.64e-07!57;UBERON:0005068!6.64e-07!57;UBERON:0006241!6.64e-07!57;UBERON:0007135!6.64e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.58e-08,81;UBERON:0001016,2.56e-07,89;UBERON:0002050,4.27e-07,564;UBERON:0001049,6.29e-07,56;UBERON:0005068,6.29e-07,56;UBERON:0006241,6.29e-07,56;UBERON:0007135,6.29e-07,56;UBERON:0000955,6.52e-07,68;UBERON:0006238,6.52e-07,68 | |||
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| ||
|short_description=p2@CLOCK | |||
}} | }} |
Latest revision as of 01:52, 18 September 2015
Short description: | p2@CLOCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLOCK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506923_5end |
EntrezGene: | CLOCK |
HGNC: | 2082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.58e-08 | 81 |
nervous system | 2.56e-07 | 89 |
embryonic structure | 4.27e-07 | 564 |
neural tube | 6.29e-07 | 56 |
neural rod | 6.29e-07 | 56 |
future spinal cord | 6.29e-07 | 56 |
neural keel | 6.29e-07 | 56 |
brain | 6.52e-07 | 68 |
future brain | 6.52e-07 | 68 |