FFCP PHASE1:Hg19::chr4:40198642..40198689,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:40198642..40198689,+ to FFCP PHASE1:Hg19::chr4:40198642..40198689,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514143,ENST00000515503,ENST00000515702,ENST00000515718_5end | |||
|cluster_id=chr4:40198642..40198689,+ | |||
|coexpression_cluster_id=C871 | |||
|description=CAGE_peak_1_at_RHOH_5end | |||
|id=chr4:40198642..40198689,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.87e-64!172;CL:0000566!1.87e-64!172;CL:0002032!3.86e-59!165;CL:0000837!3.86e-59!165;CL:0000988!6.23e-58!182;CL:0000738!2.92e-55!140;CL:0002031!8.73e-45!124;CL:0002087!8.36e-43!119;CL:0000542!4.03e-34!53;CL:0000051!4.03e-34!53;CL:0000838!1.27e-33!52;CL:0000763!3.35e-25!112;CL:0000049!3.35e-25!112;CL:0000084!3.46e-17!25;CL:0000827!3.46e-17!25;CL:0000766!7.34e-17!76;CL:0000945!4.92e-15!24;CL:0000826!4.92e-15!24;CL:0000791!1.27e-14!18;CL:0000789!1.27e-14!18;CL:0002420!1.27e-14!18;CL:0002419!1.27e-14!18;CL:0000790!1.27e-14!18;CL:0000557!9.80e-14!71;CL:0000839!1.61e-13!70;CL:0002057!7.57e-13!42;CL:0000860!1.44e-11!45;CL:0000236!2.22e-11!14;CL:0002009!5.92e-11!65;CL:0002194!1.74e-10!63;CL:0000576!1.74e-10!63;CL:0000040!1.74e-10!63;CL:0000559!1.74e-10!63;CL:0000625!1.56e-09!11;CL:0000134!9.96e-08!358;CL:0002320!7.97e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.57e-22;53!CL:0000084;6.85e-19;25!CL:0000945;2.04e-17;24!CL:0000791;9.06e-17;18!CL:0000789;9.06e-17;18!CL:0002419;9.06e-17;18!CL:0002087;8.90e-15;104!CL:0000236;1.77e-12;13!CL:0000738;3.54e-12;136!CL:0000860;3.86e-12;33!CL:0002057;3.86e-12;33!CL:0000625;7.56e-11;11!CL:0000988;1.13e-10;177!CL:0000473;4.91e-08;39!CL:0000234;4.91e-08;39!CL:0000763;7.57e-08;100!CL:0000576;1.62e-07;48!CL:0000624;2.89e-07;6!CL:0000766;3.70e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.75e-68,168;CL:0002032,2.85e-62,161;CL:0000837,2.85e-62,161;CL:0000988,5.06e-62,177;CL:0000738,1.80e-59,136;CL:0002031,1.63e-47,120;CL:0002087,3.05e-45,115;CL:0000542,8.71e-39,53;CL:0000051,8.71e-39,53;CL:0000838,3.33e-38,52;CL:0000763,1.14e-24,108;CL:0000049,1.14e-24,108;CL:0000084,6.88e-19,25;CL:0000827,6.88e-19,25;CL:0000945,2.10e-17,24;CL:0000826,2.10e-17,24;CL:0000791,9.04e-17,18;CL:0000789,9.04e-17,18;CL:0002420,9.04e-17,18;CL:0002419,9.04e-17,18;CL:0000790,9.04e-17,18;CL:0000766,2.09e-16,72;CL:0000236,5.42e-13,14;CL:0000557,5.76e-13,67;CL:0000839,1.01e-12,66;CL:0000860,2.32e-11,42;CL:0002057,2.32e-11,42;CL:0000134,5.01e-11,354;CL:0000625,7.64e-11,11;CL:0002320,4.52e-10,361;CL:0002009,6.19e-10,61;CL:0002194,2.03e-09,59;CL:0000576,2.03e-09,59;CL:0000040,2.03e-09,59;CL:0000559,2.03e-09,59;CL:0000473,2.92e-09,48;CL:0000234,2.92e-09,48;CL:0000219,1.66e-07,386;CL:0000624,2.90e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.57e-22;53!CL:0000790;9.06e-17;18!CL:0002057;7.38e-09;42 | |||
|ontology_enrichment_disease=DOID:2531!8.57e-11!51;DOID:0060083!8.57e-11!51;DOID:1240!2.81e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.68e-07;51!DOID:0060083;2.68e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.38e-11,51;DOID:0060083,3.38e-11,51;DOID:1240,4.54e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-19!115;UBERON:0002390!1.77e-18!102;UBERON:0003061!1.77e-18!102;UBERON:0002193!6.73e-17!112;UBERON:0002371!7.96e-11!80;UBERON:0002405!6.03e-10!115;UBERON:0001474!2.50e-09!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.60e-07;15!UBERON:0000179;2.60e-07;15!UBERON:0000463;2.60e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.50e-19,98;UBERON:0003061,2.50e-19,98;UBERON:0002193,3.24e-17,108;UBERON:0002405,4.88e-12,93;UBERON:0002371,1.71e-10,76;UBERON:0002384,8.47e-10,371;UBERON:0001474,3.27e-09,82;UBERON:0007023,7.51e-08,114;UBERON:0000178,2.59e-07,15;UBERON:0000179,2.59e-07,15;UBERON:0000463,2.59e-07,15;UBERON:0004765,3.27e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.3798419914348,53.3653831424647,48.3284197265991,223.430909250177,166.965788172288,57.5915978735803,0,0,0,99.9326887485891,77.3400624731573,62.5368935783225,63.7094719811659,94.2558903109666,91.5785874420895,3.58264758783879,17.8141516310439,3.34848237924443,1.74477886535478,6.42389104270976,2.18325655069035,3.48643555358527,6.16751832032739,4.95530193432166,55.8123241104972,39.7049095120106,70.2352222769098,14.8240642716746,12.2642089880927,18.9597081232078,2.44715041405386,6.82265375144614,2.9214052977861,11.9372718024652,19.5766706516417,17.2621023965741,20.1209293113897,27.7254484094068,33.6717552920828,5.22376629531451,9.64554881974938,10.5879782329248,40.9535324368492,42.7615993104565,65.5910311009452,10.2917915447673,17.3090488914155,9.17740923578565,0.422510572623884,0.212604299965044,0.419317291016752,0.336985893439485,0,1.12507910687956,0.285012743741249,0,0.547992461293902,207.675568464361,182.410296161552,187.68645256521,246.650068643441,232.630068467923,197.714839344342,179.143160524698,218.478309788598,566.936117233011,671.799344640354,653.304946866016,137.458181722187,209.069693992113,36.8737718685108,517.543405169495,435.062914363325,356.10179626715,178.053617591072,461.831851819798,418.527860269504,374.06731854319,155.417587354817,323.182680499896,283.120317277868,298.155054005282,118.868744705427,131.229881687917,108.364579133823,120.764957772416,178.808503898527,345.062832478115,310.347360584067,297.926242844184,109.910062416639,280.517401316606,287.616171868961,264.6585978524,175.529543292577,183.60553398751,156.824587333982,175.871739082839,171.758032169229,188.645397094042,149.169668787731,142.055143467341,375.996576114126,350.346656476395,397.977461869932,0,0,0,0,0,0,0,0,0.850813354476611,0.443458794925128,1.93236528524877,3.47094550068939,0,0,1.9472843619281,2.43781632218974,1.46253756570752,69.1622810485492,134.99079894411,97.6933228496756,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,1.47065232138347,0,0.0892997282840798,0,0,0,0,0.366403487860815,47.4409502769828,81.4338554711483,0,0,0,0,0,2.12801029319014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.132529768321485,0.580969714347592,0.621966330092223,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,3.9313088667105,5.90789906681404,59.5975184209778,0,0.171567810298526,0,0,0,0,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0,0,0,0,0,0,74.3921489222875,31.2571940746952,243.403207644866,570.426775624333,184.81892253622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,6.72510863961164,307.170955154805,382.307690225924,309.306717434194,0.254094624222463,0,0,0,0,14.9801404789436,53.8490626567245,26.5225928599063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,182.369399040387,222.617055244813,142.694744783205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,3.28889814968902,3.13722541229881,0,0,0,4.53380451249978,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,1.87498580315422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98488144489275,0,0,0,0,0,1.89996871767898,0,0,0,0,2.68120910214315,0,2.54188262097304,0,0,0,0,73.5799033386646,77.9929951285223,55.8254243430679,87.1928298175508,99.9610323599452,86.8954236998241,78.8445898367648,72.1743910427786,8.22545347681543,0,0,32.3297524718751,58.4290312554602,49.4435811271478,51.6541123641384,10.9768654288049,49.7913962344153,40.8530014657094,0.324621940274555,14.6014532618999,0.228234679033192,3.13359791546046,2.50634477090067,14.5590928909379,10.4382248817405,0.201799707191048,0,0,0,0,0,1.75849285861836,0,6.15436994738562,11.6295941744673,11.3244469119259,5.63948020351398,0,3.07667176470977,0,0.222886768554957,0,0,1.78178808499583,0,4.97073823883149,0.703347082052564,0,24.5557772597872,0,4.98119970627674,68.5184110517246,0,0,29.6634381161177,0,0,0,1.53471711068062,10.6534878087888,76.6345895510207,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,60.9453641971002,0,1.77148277162768,1.20596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,2.46240827212151,0,0,0.0897576444097721,0,0.638002319463839,0.183195186803725,2.66517388009317,229.934920940407,22.4481766644885,12.1334527787114,2.93274358802335,3.33306308340157,4.02771808742022,8.34916423986414,20.6617552674492,0,0,0,0,8.95735737970654,5.04208117669033,3.66618086960175,0,0,0,1.21322039365219,2.40773294189637,0,40.5049632058778,0,0,0.394584402849391,18.1486074072996,0,4.54943373325113,0,0,0,0,0,0,0,0.416024019039416,0,0,0,2.44617335538842,0,0.19351266257817,0,0,5.52837393983991,2.82419605412801,1.80784592624426,0,0,0.379864775735272,0,0,8.75157278431345,0,0,0,0.514784993585894,0,0,0,0,0,0,0,4.80336230967832,0.958337652243951,2.5549317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| ||
|short_description=p1@RHOH | |||
}} | }} |
Latest revision as of 18:07, 17 September 2015
Short description: | p1@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHOH_5end |
Coexpression cluster: | C871_CD19_Mast_CD4_CD8_Natural_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000514143, ENST00000515503, ENST00000515702, ENST00000515718_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.50e-19 | 98 |
blood island | 2.50e-19 | 98 |
hemolymphoid system | 3.24e-17 | 108 |
immune system | 4.88e-12 | 93 |
bone marrow | 1.71e-10 | 76 |
connective tissue | 8.47e-10 | 371 |
bone element | 3.27e-09 | 82 |
adult organism | 7.51e-08 | 114 |
blood | 2.59e-07 | 15 |
haemolymphatic fluid | 2.59e-07 | 15 |
organism substance | 2.59e-07 | 15 |
skeletal element | 3.27e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.38e-11 | 51 |
immune system cancer | 3.38e-11 | 51 |
leukemia | 4.54e-08 | 39 |