FFCP PHASE1:Hg19::chr4:40198330..40198334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399 | |EntrezGene=399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |HGNC=686 | ||
|TSSclassifier=strong | |||
|UniProt=Q15669,Q6ICP4 | |UniProt=Q15669,Q6ICP4 | ||
|association_with_transcript=-192bp_to_ENST00000381799,NM_004310,uc003guz.2_5end | |||
|cluster_id=chr4:40198330..40198334,+ | |||
|description=CAGE_peak_11_at_RHOH_5end | |||
|id=chr4:40198330..40198334,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.59e-39!53;CL:0000051!2.59e-39!53;CL:0000838!2.12e-37!52;CL:0000945!1.13e-21!24;CL:0000826!1.13e-21!24;CL:0000084!8.05e-15!25;CL:0000827!8.05e-15!25;CL:0002087!5.13e-14!119;CL:0002031!5.31e-12!124;CL:0000738!2.30e-11!140;CL:0000791!5.67e-11!18;CL:0000789!5.67e-11!18;CL:0002420!5.67e-11!18;CL:0002419!5.67e-11!18;CL:0000790!5.67e-11!18;CL:0000624!3.62e-10!6;CL:0002032!5.20e-09!165;CL:0000837!5.20e-09!165;CL:0000037!6.02e-09!172;CL:0000566!6.02e-09!172;CL:0000898!5.58e-08!3;CL:0000988!5.81e-08!182;CL:0000236!8.54e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.27e-14;24!CL:0000236;8.15e-10;13!CL:0000542;3.34e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.25e-14,24;CL:0000826,5.25e-14,24;CL:0000542,8.66e-12,53;CL:0000051,8.66e-12,53;CL:0000236,3.25e-09,14;CL:0000838,5.83e-09,52 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.17e-15;1!UBERON:0001045;1.84e-14;1!CL:0000051;3.34e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.45e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.84e-14;1!DOID:0060058;1.15e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.84e-14,1;DOID:0060058,9.27e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.99e-12!7;UBERON:0002106!1.50e-07!3;UBERON:0004854!1.50e-07!3;UBERON:0009034!1.50e-07!3;UBERON:0002095!1.50e-07!3;UBERON:0004782!1.50e-07!3;UBERON:0003281!1.50e-07!3;UBERON:0009664!1.50e-07!3;UBERON:0002296!1.50e-07!3;UBERON:0005602!1.50e-07!3;UBERON:0001179!1.50e-07!3;UBERON:0006293!1.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.17e-15;1!UBERON:0001785;8.17e-15;1!UBERON:0002464;8.17e-15;1!UBERON:0004904;8.17e-15;1!UBERON:0001021;8.17e-15;1!UBERON:0001154;1.84e-14;1!UBERON:0001153;1.84e-14;1!UBERON:0009854;1.84e-14;1!UBERON:0000178;1.82e-08;15!UBERON:0000179;1.82e-08;15!UBERON:0000463;1.82e-08;15!UBERON:0003714;4.68e-08;2!UBERON:0005162;4.68e-08;2!UBERON:0000122;4.68e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.17e-15,1;UBERON:0001785,8.17e-15,1;UBERON:0002464,8.17e-15,1;UBERON:0004904,8.17e-15,1;UBERON:0001021,8.17e-15,1;UBERON:0003902,8.17e-15,1;UBERON:0005425,8.17e-15,1;UBERON:0001154,2.11e-14,1;UBERON:0001153,2.11e-14,1;UBERON:0001045,2.11e-14,1;UBERON:0000178,2.07e-08,15;UBERON:0000179,2.07e-08,15;UBERON:0000463,2.07e-08,15;UBERON:0003714,4.69e-08,2;UBERON:0005162,4.69e-08,2;UBERON:0000122,4.69e-08,2 | |||
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| ||
|short_description=p11@RHOH | |||
}} | }} |
Latest revision as of 18:06, 17 September 2015
Short description: | p11@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RHOH_5end |
Coexpression cluster: | NA |
Association with transcript: | -192bp_to_ENST00000381799, NM_004310, uc003guz.2_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | Q15669Q6ICP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.25e-14 | 24 |
pro-B cell | 5.25e-14 | 24 |
lymphocyte | 8.66e-12 | 53 |
common lymphoid progenitor | 8.66e-12 | 53 |
B cell | 3.25e-09 | 14 |
lymphoid lineage restricted progenitor cell | 5.83e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.17e-15 | 1 |
cranial nerve | 8.17e-15 | 1 |
nerve trunk | 8.17e-15 | 1 |
nerve connecting eye with brain | 8.17e-15 | 1 |
nerve | 8.17e-15 | 1 |
retinal neural layer | 8.17e-15 | 1 |
presumptive neural retina | 8.17e-15 | 1 |
vermiform appendix | 2.11e-14 | 1 |
caecum | 2.11e-14 | 1 |
midgut | 2.11e-14 | 1 |
blood | 2.07e-08 | 15 |
haemolymphatic fluid | 2.07e-08 | 15 |
organism substance | 2.07e-08 | 15 |
neural tissue | 4.69e-08 | 2 |
multi cell component structure | 4.69e-08 | 2 |
neuron projection bundle | 4.69e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.84e-14 | 1 |
lymphoma | 9.27e-13 | 10 |