FFCP PHASE1:Hg19::chr4:3392202..3392212,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:3392202..3392212,+ | |||
|coexpression_cluster_id=C1913 | |||
|description=CAGE_peak_at_chr4:3392202..3392212,+ | |||
|id=chr4:3392202..3392212,+ | |||
|ontology_enrichment_celltype=CL:0001014!4.40e-13!2;CL:0001016!4.40e-13!2;CL:0000842!1.19e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.47e-07;10 | |||
|ontology_enrichment_disease=DOID:225!5.84e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.33e-61!32;UBERON:0001950!3.97e-61!20;UBERON:0001893!1.26e-57!34;UBERON:0002619!1.52e-55!22;UBERON:0002791!3.72e-53!33;UBERON:0002020!1.58e-51!34;UBERON:0003528!1.58e-51!34;UBERON:0000956!8.87e-49!25;UBERON:0000203!8.87e-49!25;UBERON:0002780!2.35e-47!41;UBERON:0001890!2.35e-47!41;UBERON:0006240!2.35e-47!41;UBERON:0003080!3.67e-46!42;UBERON:0001049!7.65e-37!57;UBERON:0005068!7.65e-37!57;UBERON:0006241!7.65e-37!57;UBERON:0007135!7.65e-37!57;UBERON:0000955!3.70e-36!69;UBERON:0006238!3.70e-36!69;UBERON:0002616!1.79e-35!59;UBERON:0003056!2.34e-34!61;UBERON:0001017!7.51e-30!82;UBERON:0005743!2.77e-28!86;UBERON:0003075!8.69e-26!86;UBERON:0007284!8.69e-26!86;UBERON:0000073!3.12e-25!94;UBERON:0001016!3.12e-25!94;UBERON:0000200!1.33e-24!6;UBERON:0002346!1.85e-24!90;UBERON:0007023!1.37e-22!115;UBERON:0000033!1.53e-20!123;UBERON:0000153!2.21e-19!129;UBERON:0007811!2.21e-19!129;UBERON:0002021!2.75e-19!5;UBERON:0001871!4.36e-18!7;UBERON:0002771!4.82e-18!3;UBERON:0004121!1.28e-13!169;UBERON:0001870!1.77e-13!2;UBERON:0000924!3.35e-13!173;UBERON:0006601!3.35e-13!173;UBERON:0001872!8.74e-12!5;UBERON:0002420!1.21e-10!9;UBERON:0007245!1.21e-10!9;UBERON:0010009!1.21e-10!9;UBERON:0010011!1.21e-10!9;UBERON:0000454!1.21e-10!9;UBERON:0000064!1.72e-08!219;UBERON:0009663!3.65e-08!7;UBERON:0000025!5.13e-08!194;UBERON:0002022!1.12e-07!1;UBERON:0002702!1.20e-07!1;UBERON:0007190!2.52e-07!1;UBERON:0001882!2.67e-07!1;UBERON:0005403!2.67e-07!1;UBERON:0002902!4.89e-07!1;UBERON:0009899!4.89e-07!1;UBERON:0000369!5.69e-07!4;UBERON:0002435!5.69e-07!4;UBERON:0000204!5.69e-07!4;UBERON:0010082!5.69e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;2.39e-66;1!UBERON:0001872;1.60e-14;5!UBERON:0001950;1.09e-13;20!UBERON:0002619;1.33e-12;22!UBERON:0000956;2.77e-11;25!UBERON:0000203;2.77e-11;25!UBERON:0001869;1.25e-08;32!UBERON:0000955;3.67e-08;68!UBERON:0003528;5.60e-08;34!UBERON:0002020;5.60e-08;34!UBERON:0001893;5.60e-08;34!UBERON:0002791;9.94e-08;32!UBERON:0001017;1.64e-07;75!UBERON:0002780;7.91e-07;41!UBERON:0001890;7.91e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,4.66e-66,1;UBERON:0001872,1.60e-14,5;UBERON:0001950,1.16e-13,20;UBERON:0002619,1.41e-12,22;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41 | |||
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|short_description=p@chr4:3392202..3392212,+ | |||
}} | }} |
Latest revision as of 04:50, 30 July 2015
Short description: | p@chr4:3392202..3392212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:3392202..3392212, + |
Coexpression cluster: | C1913_brain_parietal_insula_temporal_frontal_postcentral_paracentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insula | 4.66e-66 | 1 |
parietal lobe | 1.60e-14 | 5 |
neocortex | 1.16e-13 | 20 |
regional part of cerebral cortex | 1.41e-12 | 22 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |