FFCP PHASE1:Hg19::chr4:169552802..169552809,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:169552802..169552809,+ to FFCP PHASE1:Hg19::chr4:169552802..169552809,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23022 | |EntrezGene=23022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |HGNC=17068 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003irv.2_5end | |||
|cluster_id=chr4:169552802..169552809,+ | |||
|coexpression_cluster_id=C947 | |||
|description=CAGE_peak_19_at_PALLD_5end | |||
|id=chr4:169552802..169552809,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.29e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000062;4.08e-09;9!CL:0000064;1.05e-08;3!CL:0000067;1.05e-08;3!CL:0005012;1.05e-08;3!CL:0002304;1.05e-08;3!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0002590;4.38e-08;3!CL:0002603;5.29e-08;3!CL:0002580;1.17e-07;3!CL:0000708;4.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,6.30e-10,11;CL:0000375,6.30e-10,11;CL:0000335,6.30e-10,11;CL:0000064,9.58e-09,3;CL:0000067,9.58e-09,3;CL:0005012,9.58e-09,3;CL:0002304,9.58e-09,3;CL:0000128,1.32e-08,7;CL:0000126,1.32e-08,7;CL:0000127,1.32e-08,7;CL:0002453,1.32e-08,7;CL:0002603,2.61e-08,3;CL:0002590,5.45e-08,3;CL:0002580,6.27e-08,3;CL:0000708,1.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000335;1.11e-09;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;2.79e-10;11!UBERON:0001778;1.05e-08;3!UBERON:0001775;1.05e-08;3!UBERON:0005284;6.68e-08;5!UBERON:0003210;4.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,3.74e-10,11;UBERON:0001778,9.58e-09,3;UBERON:0001775,9.58e-09,3;UBERON:0005284,1.04e-07,5;UBERON:0003210,1.12e-07,3 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.563817616383885,0,0.893922188854576,1.74467704820074,0,0,0,1.47440361900905,0,0.873765488520689,0.527533956456907,0.247532705920093,0,0.672325146451775,0,0,0,1.84681587115182,3.26401105990805,2.82109249330279,0.85870796139317,0.958120975510189,2.25976751270645,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,0.724232594804119,0.795285947051099,0,3.68685786939865,3.76939975686359,4.30390449896318,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,1.51956613997496,0.926864265692532,0,0,0.560677600142307,1.06748995729705,1.97334038733728,0,0.134710672069688,0,1.21085942115945,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0.277064115484183,0.438977620880838,1.5324389789951,1.05166641234618,0.113432183160021,0.538168907066586,0.427114777637135,0,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0.0974370051611986,0.504867548488229,0.460249493211497,1.45481451136931,0,0.10075209822764,0.339121184620975,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0,0,0,0.36497735907583,0,2.57296375277154,1.38134921352481,0,0.721879481669586,1.18306800039844,0.842923450390509,0.723033089650446,0.882351781859152,1.52515610864684,0.71181185733329,1.07865046528132,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0,0,0,0,0,0.579652024875384,2.46558257895225,0,0,0,0.790204397959275,0,0,0,0,0,2.18376766658517,3.1190521393325,0.0895585227028483,0,0,0,0.088048434013226,0.621984346622316,1.29707958075265,1.38866676769018,0,0,0,0,0,0,0,1.56983518083505,1.74384027533312,1.83345714552375,0,0,0,0.531876233169741,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,3.35474797688216,4.59447743336456,0,4.1986578933598,0.205476322550383,2.86497541183833,0,0,0,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,0.207970861530807,1.78428988797162,1.41932173530541,1.63997980989798,2.70851489754947,2.27407504055985,0,1.99267679560631,0.921845842708516,0.0868836144680828,0.979005787313703,1.37257369524342,0,0,0,0,0,0,1.48864684691266,4.14347327877769,1.68396056659844,0.128139149255701,2.04682899626681,1.28683136914886,1.48418066444991,0.154209693802656,0,0.246381468041427,0.519254429183621,0,0,0.601519410909855,0,0,0,0.786746489756545,0,0.0770153371044148,0,0,0.844413031143006,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0,2.83865340936865,2.55779449753823,1.14853107599234,0,0,0.580024309752732,0,0.15350367472613,1.37836572484531,0.214840489736547,0.580066775656914,0.767039646744908,1.95870478422822,1.15699440752685,0.192190067365106,0.255225424989168,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,2.232950216158,6.32758849437452,1.33441135746677,0,0,0,0,0.719489830333259,0,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0.272999822815972,0,0,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,1.239293992399,2.25356482025793,0.143411352204052,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,1.19548792950642,0,0,1.32949287252801,0,0.311039587661807,0.269605053441981,0,0,0.197286811273867,0,8.89095921157095,0,0,0,0.7812832832557,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,1.30726156222788,0,1.46205491157214,0,0.69169171316418,0.807818799687949,0.434589487688032,0.638002319463839,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0.432777279484182,0,0.265372693510018,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0,0.967563312890852,1.09633975629278,0.656923656425674,0.193978032976839,0,0,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0.343609788497747,0.171594997861965,0,0,2.59263438078475,0,0,0.509991088181609,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0.599037001496973,1.28767814440971,0.446342914883745,0.403100834920358,0.720599767084807,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.891727998294968,0,1.79287339332845,0.191915197319445,0,1.32418394073086,0,0,0,0,1.19730191562487,0,1.36310417428337,0.453248366080503,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,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| 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| ||
|short_description=p19@PALLD | |||
}} | }} |
Latest revision as of 16:44, 16 September 2015
Short description: | p19@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PALLD_5end |
Coexpression cluster: | C947_bone_Myoblast_mesenchymal_uterus_Preadipocyte_Ciliary_Astrocyte |
Association with transcript: | 0bp_to_uc003irv.2_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 6.30e-10 | 11 |
osteoprogenitor cell | 6.30e-10 | 11 |
mesenchyme condensation cell | 6.30e-10 | 11 |
ciliated cell | 9.58e-09 | 3 |
ciliated epithelial cell | 9.58e-09 | 3 |
multi-ciliated epithelial cell | 9.58e-09 | 3 |
non-pigmented ciliary epithelial cell | 9.58e-09 | 3 |
oligodendrocyte | 1.32e-08 | 7 |
macroglial cell | 1.32e-08 | 7 |
astrocyte | 1.32e-08 | 7 |
oligodendrocyte precursor cell | 1.32e-08 | 7 |
astrocyte of the cerebellum | 2.61e-08 | 3 |
smooth muscle cell of the brain vasculature | 5.45e-08 | 3 |
preadipocyte of the breast | 6.27e-08 | 3 |
leptomeningeal cell | 1.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 3.74e-10 | 11 |
ciliary epithelium | 9.58e-09 | 3 |
ciliary body | 9.58e-09 | 3 |
brain vasculature | 1.04e-07 | 5 |
blood-cerebrospinal fluid barrier | 1.12e-07 | 3 |