FFCP PHASE1:Hg19::chr4:158141844..158141895,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:158141844..158141895,+ to FFCP PHASE1:Hg19::chr4:158141844..158141895,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2891 | |EntrezGene=2891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4572 | |HGNC=4572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000296526,ENST00000471736_5end | |||
|cluster_id=chr4:158141844..158141895,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRIA2_5end | |||
|id=chr4:158141844..158141895,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.00e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.15e-23;82!UBERON:0006215;1.94e-08;3!UBERON:0006241;6.91e-08;3!UBERON:0003057;6.91e-08;3!UBERON:0010122;9.73e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.19e-59;41!UBERON:0001890;1.19e-59;41!UBERON:0001893;7.63e-58;34!UBERON:0003528;3.00e-57;34!UBERON:0002020;3.00e-57;34!UBERON:0001869;5.81e-57;32!UBERON:0002791;1.01e-56;32!UBERON:0000073;1.68e-55;53!UBERON:0002616;1.68e-55;53!UBERON:0002619;1.03e-53;22!UBERON:0001950;1.89e-48;20!UBERON:0000956;1.01e-46;25!UBERON:0000203;1.01e-46;25!UBERON:0001017;2.10e-38;75!UBERON:0000955;9.64e-38;68!UBERON:0001016;5.18e-34;83!UBERON:0002420;1.42e-23;9!UBERON:0007245;1.42e-23;9!UBERON:0010009;1.42e-23;9!UBERON:0010011;1.42e-23;9!UBERON:0000454;1.42e-23;9!UBERON:0000125;1.62e-22;9!UBERON:0002308;1.62e-22;9!UBERON:0009663;2.13e-18;7!UBERON:0004732;4.26e-17;13!UBERON:0000200;1.26e-16;6!UBERON:0007023;1.70e-16;114!UBERON:0001894;2.00e-16;7!UBERON:0004733;4.47e-15;12!UBERON:0002028;4.47e-15;12!UBERON:0000349;1.39e-14;5!UBERON:0001871;4.89e-14;6!UBERON:0002298;5.69e-14;6!UBERON:0001872;7.04e-14;5!UBERON:0002021;1.07e-13;5!UBERON:0011216;4.33e-13;132!UBERON:0000369;6.23e-12;4!UBERON:0002435;6.23e-12;4!UBERON:0000204;6.23e-12;4!UBERON:0002784;5.11e-10;4!UBERON:0003296;7.53e-10;4!UBERON:0010133;7.53e-10;4!UBERON:0002680;1.59e-09;9!UBERON:0001895;1.59e-09;9!UBERON:0001870;2.00e-09;3!UBERON:0005383;2.05e-09;3!UBERON:0005382;2.05e-09;3!UBERON:0010314;4.46e-09;132!UBERON:0000988;6.58e-08;3!UBERON:0002240;6.91e-08;3!UBERON:0005174;6.91e-08;3!UBERON:0001137;6.91e-08;3!UBERON:0001896;9.83e-08;3!UBERON:0005290;9.83e-08;3!UBERON:0001876;7.20e-07;2!UBERON:0001954;7.40e-07;2!UBERON:0003022;7.40e-07;2!UBERON:0002421;7.40e-07;2!UBERON:0002600;7.40e-07;2!UBERON:0002702;8.49e-07;2!UBERON:0001873;9.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.50e-104,56;UBERON:0005068,1.50e-104,56;UBERON:0006241,1.50e-104,56;UBERON:0007135,1.50e-104,56;UBERON:0001017,1.74e-100,81;UBERON:0000073,7.96e-98,53;UBERON:0002616,7.96e-98,53;UBERON:0001016,1.37e-95,89;UBERON:0002780,6.15e-84,41;UBERON:0001890,6.15e-84,41;UBERON:0003080,6.15e-84,41;UBERON:0006240,6.15e-84,41;UBERON:0000955,3.95e-83,68;UBERON:0006238,3.95e-83,68;UBERON:0002346,9.30e-75,86;UBERON:0003075,3.28e-73,82;UBERON:0007284,3.28e-73,82;UBERON:0001893,2.10e-68,34;UBERON:0003528,5.10e-68,34;UBERON:0002020,5.10e-68,34;UBERON:0001869,4.69e-64,32;UBERON:0002791,1.14e-63,32;UBERON:0010371,2.09e-59,104;UBERON:0003056,4.32e-59,61;UBERON:0007023,1.38e-55,114;UBERON:0002619,1.03e-53,22;UBERON:0004121,2.27e-51,171;UBERON:0000924,2.27e-51,171;UBERON:0006601,2.27e-51,171;UBERON:0001950,1.89e-48,20;UBERON:0000956,1.01e-46,25;UBERON:0000203,1.01e-46,25;UBERON:0010314,4.36e-44,132;UBERON:0011216,2.24e-37,223;UBERON:0000025,1.33e-24,192;UBERON:0002420,1.38e-23,9;UBERON:0007245,1.38e-23,9;UBERON:0010009,1.38e-23,9;UBERON:0010011,1.38e-23,9;UBERON:0000454,1.38e-23,9;UBERON:0000125,1.52e-22,9;UBERON:0002308,1.52e-22,9;UBERON:0003076,5.78e-21,15;UBERON:0003057,5.78e-21,15;UBERON:0009663,2.13e-18,7;UBERON:0004732,4.22e-17,13;UBERON:0004111,6.09e-17,240;UBERON:0000200,1.29e-16,6;UBERON:0001894,2.00e-16,7;UBERON:0006222,2.00e-16,7;UBERON:0004733,4.39e-15,12;UBERON:0002028,4.39e-15,12;UBERON:0007277,4.39e-15,12;UBERON:0000349,1.36e-14,5;UBERON:0001871,4.78e-14,6;UBERON:0002298,5.48e-14,6;UBERON:0001872,7.05e-14,5;UBERON:0002021,1.07e-13,5;UBERON:0000483,3.71e-13,306;UBERON:0000119,6.81e-13,309;UBERON:0000369,6.24e-12,4;UBERON:0002435,6.24e-12,4;UBERON:0000204,6.24e-12,4;UBERON:0010082,6.24e-12,4;UBERON:0002784,4.99e-10,4;UBERON:0003296,7.53e-10,4;UBERON:0010133,7.53e-10,4;UBERON:0002050,1.21e-09,564;UBERON:0002680,1.56e-09,9;UBERON:0001895,1.56e-09,9;UBERON:0010092,1.56e-09,9;UBERON:0001870,2.05e-09,3;UBERON:0005383,2.05e-09,3;UBERON:0005382,2.05e-09,3;UBERON:0000923,3.12e-09,560;UBERON:0010316,3.12e-09,560;UBERON:0005291,3.12e-09,560;UBERON:0006598,3.12e-09,560;UBERON:0010317,3.12e-09,560;UBERON:0002532,3.12e-09,560;UBERON:0000922,6.18e-09,592;UBERON:0005423,7.59e-09,581;UBERON:0000988,6.35e-08,3;UBERON:0002240,7.00e-08,3;UBERON:0005174,7.00e-08,3;UBERON:0001137,7.00e-08,3;UBERON:0001896,9.83e-08,3;UBERON:0005290,9.83e-08,3;UBERON:0010096,9.83e-08,3;UBERON:0001876,7.01e-07,2;UBERON:0001954,7.40e-07,2;UBERON:0003022,7.40e-07,2;UBERON:0002421,7.40e-07,2;UBERON:0002600,7.40e-07,2;UBERON:0002702,8.73e-07,2;UBERON:0001873,9.73e-07,2;UBERON:0010122,9.73e-07,2 | |||
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| ||
|short_description=p2@GRIA2 | |||
}} | }} |
Latest revision as of 09:31, 16 September 2015
Short description: | p2@GRIA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000296526, ENST00000471736_5end |
EntrezGene: | GRIA2 |
HGNC: | 4572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.00e-07 | 8 |