FFCP PHASE1:Hg19::chr4:146446878..146446885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4086 | |EntrezGene=4086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6767 | |HGNC=6767 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000502342_5end | |||
|cluster_id=chr4:146446878..146446885,+ | |||
|description=CAGE_peak_36_at_SMAD1_5end | |||
|id=chr4:146446878..146446885,+ | |||
|ontology_enrichment_celltype=CL:0000817!8.44e-14!3;CL:0002144!8.44e-14!3;CL:0000819!3.41e-11!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060073!3.41e-11!1;DOID:8675!3.41e-11!1;DOID:0060058!1.99e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.87e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001915!8.44e-14!3;UBERON:0001982!8.44e-14!3;UBERON:0001282!1.21e-10!1;UBERON:0009842!1.21e-10!1;UBERON:0003704!1.21e-10!1;UBERON:0001171!1.21e-10!1;UBERON:0001172!1.21e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.49e-07;16!UBERON:0002036;1.49e-07;16 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p36@SMAD1 | |||
}} | }} |
Latest revision as of 23:23, 15 September 2015
Short description: | p36@SMAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_SMAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000502342_5end |
EntrezGene: | SMAD1 |
HGNC: | 6767 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.73e-11 | 10 |