FFCP PHASE1:Hg19::chr4:142054590..142054648,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:142054590..142054648,- to FFCP PHASE1:Hg19::chr4:142054590..142054648,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57484 | |EntrezGene=57484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23138 | |HGNC=23138 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULK6 | |UniProt=Q9ULK6 | ||
|association_with_transcript=0bp_to_ENST00000306799,NM_020724,uc003iio.1,uc003iip.1,uc010iok.1_5end | |||
|cluster_id=chr4:142054590..142054648,- | |||
|coexpression_cluster_id=C1935 | |||
|description=CAGE_peak_1_at_RNF150_5end | |||
|id=chr4:142054590..142054648,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.28e-31!94;UBERON:0001016!6.28e-31!94;UBERON:0007023!1.37e-30!115;UBERON:0005743!5.46e-30!86;UBERON:0001017!3.76e-29!82;UBERON:0000955!3.73e-26!69;UBERON:0006238!3.73e-26!69;UBERON:0001049!1.00e-24!57;UBERON:0005068!1.00e-24!57;UBERON:0006241!1.00e-24!57;UBERON:0007135!1.00e-24!57;UBERON:0002346!3.02e-24!90;UBERON:0000924!3.63e-24!173;UBERON:0006601!3.63e-24!173;UBERON:0002616!2.00e-23!59;UBERON:0004121!8.94e-23!169;UBERON:0003075!9.02e-23!86;UBERON:0007284!9.02e-23!86;UBERON:0000153!2.13e-21!129;UBERON:0007811!2.13e-21!129;UBERON:0000033!3.24e-21!123;UBERON:0003080!1.36e-19!42;UBERON:0002780!4.54e-19!41;UBERON:0001890!4.54e-19!41;UBERON:0006240!4.54e-19!41;UBERON:0003056!4.71e-17!61;UBERON:0000475!3.30e-16!365;UBERON:0002020!1.03e-15!34;UBERON:0003528!1.03e-15!34;UBERON:0001893!1.51e-15!34;UBERON:0001869!2.21e-15!32;UBERON:0000481!3.13e-15!347;UBERON:0002791!3.40e-15!33;UBERON:0000468!2.10e-14!659;UBERON:0000956!3.81e-12!25;UBERON:0000203!3.81e-12!25;UBERON:0000062!4.00e-12!511;UBERON:0002619!9.72e-12!22;UBERON:0001950!7.33e-11!20;UBERON:0000064!2.77e-10!219;UBERON:0000467!1.28e-08!625;UBERON:0000477!1.70e-08!286;UBERON:0000480!1.97e-08!626;UBERON:0000922!2.79e-08!612;UBERON:0002050!4.13e-07!605;UBERON:0005423!4.13e-07!605;UBERON:0000923!7.72e-07!604;UBERON:0005291!7.72e-07!604;UBERON:0006598!7.72e-07!604;UBERON:0002532!7.72e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.70e-16;32!UBERON:0002780;9.67e-16;41!UBERON:0001890;9.67e-16;41!UBERON:0002791;1.24e-15;32!UBERON:0003528;1.48e-15;34!UBERON:0002020;1.48e-15;34!UBERON:0001893;3.56e-15;34!UBERON:0000073;5.13e-15;53!UBERON:0002616;5.13e-15;53!UBERON:0000956;1.10e-13;25!UBERON:0000203;1.10e-13;25!UBERON:0002619;3.73e-13;22!UBERON:0000955;4.04e-13;68!UBERON:0001017;2.43e-12;75!UBERON:0001950;3.85e-12;20!UBERON:0001016;7.97e-12;83!UBERON:0007023;4.09e-10;114!UBERON:0000922;1.60e-09;49!UBERON:0011216;1.22e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.48e-36,114;UBERON:0001016,2.16e-32,89;UBERON:0001017,8.60e-32,81;UBERON:0000955,2.27e-28,68;UBERON:0006238,2.27e-28,68;UBERON:0002346,1.42e-27,86;UBERON:0001049,2.42e-27,56;UBERON:0005068,2.42e-27,56;UBERON:0006241,2.42e-27,56;UBERON:0007135,2.42e-27,56;UBERON:0004121,3.65e-27,171;UBERON:0000924,3.65e-27,171;UBERON:0006601,3.65e-27,171;UBERON:0003075,2.77e-26,82;UBERON:0007284,2.77e-26,82;UBERON:0000073,3.50e-26,53;UBERON:0002616,3.50e-26,53;UBERON:0011216,1.33e-25,223;UBERON:0002780,1.66e-21,41;UBERON:0001890,1.66e-21,41;UBERON:0003080,1.66e-21,41;UBERON:0006240,1.66e-21,41;UBERON:0010314,2.88e-21,132;UBERON:0010371,1.63e-19,104;UBERON:0003056,1.76e-19,61;UBERON:0003528,1.11e-17,34;UBERON:0002020,1.11e-17,34;UBERON:0001893,1.73e-17,34;UBERON:0001869,2.65e-17,32;UBERON:0002791,5.95e-17,32;UBERON:0000956,1.29e-13,25;UBERON:0000203,1.29e-13,25;UBERON:0002619,3.76e-13,22;UBERON:0001950,3.75e-12,20;UBERON:0000922,3.44e-07,592;UBERON:0003076,4.53e-07,15;UBERON:0003057,4.53e-07,15 | |||
|phase1_expression=0.726713517082227,2.5692062866918,1.26858963686374,9.00659685178174,3.5756887554183,0,7.59899634504932,1.26343974685366,3.65659879479774,0.737201809504527,0,0.436882744260345,0.527533956456907,5.94078494208224,5.63375538737457,0.672325146451775,1.20538905604795,0,0.487932798790507,3.93987385845721,4.28401451612931,11.2843699732112,3.14859585844162,4.10623275218653,4.2684497462233,0.840547463227464,0.903106483949403,0.708397031823113,0,0,0,0,0,0,0,0,1.46800219667424,0.553995408531877,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,1.70083439972035,0,0,2.70318407114711,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,2.30152611318355,0.722878304769133,1.00267582127178,0.289693037921647,0,0.486634870302636,4.63220604103932,2.66075276955077,3.77689578480442,7.40031776562076,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,3.97577561356255,3.03913227994991,0.132409180813219,0.573673241497627,1.77334191099179,2.80338800071154,1.06748995729705,0.24666754841716,0.933633106199299,0.808264032418128,0.326923806226917,0.908144565869588,1.72852777344,0.70296429550139,0,0,0.149448680551801,1.05691048779388,0.971237666208789,1.12360645361799,0.816616685019573,1.47401180774122,2.6864703105699,27.3240657174872,36.3482386039479,0,1.43723628363248,1.0100166837244,3.37820003654303,1.10825646193673,10.5354629011401,19.3087311353382,15.7749961851927,0.794025282120147,7.89314397030993,10.4643120521098,3.60284231971255,7.20218630602566,5.77094163735258,11.8514648420989,12.2837125178849,3.37552664482532,4.77441325289873,9.34004964703224,9.38908966151453,7.11242650002772,7.10019185033229,4.03008392910561,5.93462073086707,0,0.272746120590835,0,1.82960559194393,3.18071443971565,2.09149097165133,3.31715376049185,2.52320850875628,2.18986415445498,0,16.0810234548221,1.38134921352481,5.57241513638375,1.44375896333917,11.7123732039445,9.7779120245299,7.23033089650446,10.4779274095774,10.4582133164355,8.30447166888838,12.8089742752156,10.203516186518,7.31019598198142,0,0,0.8231480226628,1.47008711385542,0,0,2.36315962672562,0,0.122988438543114,1.54411029268673,0,0,0,0.185176890317059,0,0,2.88662684050547,1.85488647960123,1.87853910777315,0.577465791044295,0,0.570762456703795,5.53143078571493,9.4433477830436,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0.380987365753014,0.381988425558278,1.17217447210047,0,3.496134751913,0,4.85904935471983,1.34557301214433,1.30788020649984,0.7333828582095,8.27338980849778,3.57656445851882,0,3.72313363218819,6.24044621468197,0,1.41849132023278,0.799266537048298,5.7191197463259,4.34097284313154,0.823240336780769,0,2.84313558994037,0,0,0.871533458600294,0.699810938274399,1.2162378064119,0,0,3.11512312139057,6.89171615004683,1.42636905040718,4.77778312003011,4.52047909610843,0.179060963239896,0,0,0,0,2.28685161800217,7.8083912314573,8.50617694055465,10.553524716064,1.27587750330633,0,0,0,17.9129577909944,6.5022167737758,1.62759014219841,20.3811444300191,26.4074903419799,32.3289950819566,30.6910507280909,7.22270639346525,13.6444502433591,4.1389228517002,2.65690239414175,2.21243002250044,1.65078867489357,0.979005787313703,0,0,0,0,0.606255142892519,0,0.30239029332968,0.744323423456331,0.460385919864187,0.561320188866147,0.384417447767103,2.55853624533352,1.93024705372329,0,0,0.710246901252508,0.0821271560138091,0,0.232420756919918,0,1.00253235151642,0,0.229628896329213,2.73136752010076,2.88473712910733,0,0.539107359730903,0,0,0.105551628892876,0,0.170093705276516,1.0795795805107,0,2.16757150035082,1.00337954770971,0.254876273045038,0,0,0,0,1.79515087581472,1.96808787419823,3.90454073597164,2.36994326789761,1.46511143709349,1.23764249880882,0,0,0,1.93341436584244,0.924291702687866,0.614014698904518,0.551346289938122,1.50388342815583,1.30515024522806,1.36362603865761,3.91740956845644,0.165284915360978,0,0,0.4046311234222,0,1.88887408098384,0,0,0,0,0.55597265731176,1.00187420719394,1.116475108079,2.21465597303108,4.95638504201945,0.511795582622668,1.71175595213568,0,0,2.87795932133304,3.56898138656871,0.942499218765491,0.202182481573316,0,0.421258456238981,1.95053495635836,0,0,3.8219975194236,0.848432591722276,0,0.551365343546124,0,0.876901770507525,0.578775534266688,1.9676842561399,0.405820753925408,1.239293992399,0.281695602532241,0.286822704408103,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,1.31717957183961,0,2.0996083214699,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,4.81239927631679,0,0,0,5.5490637811763,5.42049327277996,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0.447352215784832,0,0,0.835218521685727,0,0,0,0,0,13.1857361344705,0.485442086998054,0,0,0,0,0,16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| ||
|short_description=p1@RNF150 | |||
}} | }} |
Latest revision as of 20:23, 15 September 2015
Short description: | p1@RNF150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF150_5end |
Coexpression cluster: | C1935_heart_pineal_mature_neuroblastoma_putamen_neuroectodermal_occipital |
Association with transcript: | 0bp_to_ENST00000306799, NM_020724, uc003iio.1, uc003iip.1, uc010iok.1_5end |
EntrezGene: | RNF150 |
HGNC: | 23138 |
UniProt: | Q9ULK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data